Description
Cerebral palsy (CP) is a non-progressive neurodevelopmental disorder characterized by motor impairments, often accompanied by intellectual disability, epilepsy, visual and hearing impairment and speech and language deficits.

PMID 33528536 reported a cohort of 1345 individuals undergoing genomic testing. Diagnostic yield ranged between 10-30% depending on presence of additional characteristics such as ID/epilepsy/ASD.

The aetiology of cerebral palsy is complex. If an underlying monogenic condition is suspected, please also consider the Intellectual Disability, Genetic Epilepsy, Hereditary Spastic Paraplegia - paediatric, Dystonia, Ataxia, Malformations of Cortical Development, Mitochondrial Disorders and the Bleeding and Platelet Disorders panels among others, depending on the associated clinical features.

We would like to thank Jozef Gecz, Clare van Eyk, Luisa Weiss and team for their contribution to the development of this panel.

12 reviewers

  • Kristin Rigbye (Victorian Clinical Genetics Services)

  • Paul De Fazio (Victorian Clinical Genetics Services)

  • Clare van Eyk (University of Adelaide)

  • Danielle Ariti (University of Melbourne)

  • Mark Cleghorn (Royal Melbourne Hospital)

  • Chirag Patel (Genetic Health Queensland)

  • Krithika Murali (Victorian Clinical Genetics Services)

  • Luisa Mackenroth (University of Adelaide)

  • Dean Phelan (Victorian Clinical Genetics Services)

  • Luisa Weiss (University of Adelaide)

  • Crystle Lee (Victorian Clinical Genetics Services)

  • Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

363 Entities

363 reviewed, 161 green

List Entity Reviews Mode of inheritance Details
363 Entitiess
Green Green List (high evidence)
ACADM
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Acyl-CoA dehydrogenase, medium chain, deficiency of, MIM# 201450
Tags
Green Green List (high evidence)
ACTB
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Baraitser-Winter syndrome 1 MIM#243310
Tags
Green Green List (high evidence)
ADAR
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Aicardi-Goutieres syndrome 6, MIM# 615010
Tags
Green Green List (high evidence)
ADAT3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with brain abnormalities, poor growth, and dysmorphic facies, MIM# 615286
Tags
Green Green List (high evidence)
ADCY5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dyskinesia with orofacial involvement MIM#606703
Tags
Green Green List (high evidence)
ADD3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Cerebral palsy, spastic quadriplegic, 3 617008
Tags
Green Green List (high evidence)
ADNP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Helsmoortel-van der Aa syndrome MIM#615873
Tags
Green Green List (high evidence)
AHDC1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Xia-Gibbs syndrome, MIM#615829
Tags
Green Green List (high evidence)
ALDH3A2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Sjogren-Larsson syndrome, MIM# 270200
Tags
Green Green List (high evidence)
ALS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Spastic paralysis, infantile onset ascending, MIM# 607225
Tags
Green Green List (high evidence)
AMPD2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Pontocerebellar hypoplasia, type 9, MIM# 615809
Tags
Green Green List (high evidence)
AP4B1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Spastic paraplegia 47, autosomal recessive, MIM# 614066
Tags
Green Green List (high evidence)
AP4E1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Spastic paraplegia 51, autosomal recessive, MIM# 613744
Tags
Green Green List (high evidence)
AP4M1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Spastic paraplegia 50, autosomal recessive, MIM# 612936
Tags
Green Green List (high evidence)
AP4S1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Spastic paraplegia 52, autosomal recessive, MIM# 614067
Tags
Green Green List (high evidence)
ARG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Argininemia MIM#207800
Tags
Green Green List (high evidence)
ARID2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Coffin-Siris syndrome, MIM#617808
Tags
Green Green List (high evidence)
ARX
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Developmental and epileptic encephalopathy 1, MIM# 308350
  • Lissencephaly, X-linked 2, MIM# 300215
  • Proud syndrome, MIM# 300004
Tags
Green Green List (high evidence)
ASXL1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
  • Literature
Phenotypes
  • Bohring-Opitz syndrome (MIM 605039)
Tags
Green Green List (high evidence)
ASXL3
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Bainbridge-Ropers syndrome, MIM# 615485
Tags
Green Green List (high evidence)
ATL1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cerebral palsy
  • Spastic paraplegia 3A, autosomal dominant (OMIM 182600 )
Tags
Green Green List (high evidence)
ATM
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ataxia-telangiectasia, MIM#208900
Tags
Green Green List (high evidence)
ATP1A3
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Alternating hemiplegia of childhood 2, MIM# 614820
  • CAPOS syndrome, MIM# 601338
  • Dystonia-12, MIM# 128235
Tags
Green Green List (high evidence)
ATP7A
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Menkes disease MIM#3094009
Tags
Green Green List (high evidence)
ATP8A2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cerebellar ataxia, impaired intellectual development, and dysequilibrium syndrome, MIM#615268
Tags
Green Green List (high evidence)
ATRX
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • ATR-X-related syndrome MONDO:0016980
Tags
Green Green List (high evidence)
AUTS2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 26, MIM# 615834
Tags
  • SV/CNV
Green Green List (high evidence)
BCAP31
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Deafness, dystonia, and cerebral hypomyelination, MIM# 300475
Tags
Green Green List (high evidence)
BCL11A
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Dias-Logan syndrome, MIM# 617101
Tags
Green Green List (high evidence)
CACNA1A
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Developemental and epileptic encephalopathy 42, MIM# 617106
  • Episodic ataxia, type 2, MIM# 108500
  • Spinocerebellar ataxia 6, MIM# 183086
Tags
Green Green List (high evidence)
CACNA1G
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spinocerebellar ataxia 42, early-onset, severe, with neurodevelopmental deficits, MIM#618087
Tags
Green Green List (high evidence)
CAMTA1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebellar ataxia, nonprogressive, with mental retardation, MIM# 614756
Tags
  • SV/CNV
Green Green List (high evidence)
CASK
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder and microcephaly with pontine and cerebellar hypoplasia MIM#300749
Tags
Green Green List (high evidence)
CHD8
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder with autism and macrocephaly #615032
Tags
Green Green List (high evidence)
CLTC
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder MIM#617854
Tags
Green Green List (high evidence)
COL4A1
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • {Hemorrhage, intracerebral, susceptibility to}, MIM# 614519
  • Brain small vessel disease MIM#614483
Tags
Green Green List (high evidence)
COL4A2
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Brain small vessel disease 2 MIM# 614483
Tags
Green Green List (high evidence)
CREBBP
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Menke-Hennekam syndrome MIM#618332, Rubinstein-Taybi syndrome MIM#180849
Tags
Green Green List (high evidence)
CSMD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • complex neurodevelopmental disorder MONDO:0100038
Tags
Green Green List (high evidence)
CTNNA2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cortical dysplasia, complex, with other brain malformations MIM#618174
Tags
Green Green List (high evidence)
CTNNB1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Neurodevelopmental disorder with spastic diplegia and visual defects , MIM#615075
Tags
Green Green List (high evidence)
CYP2U1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Spastic paraplegia 56, autosomal recessive MIM# 615030
Tags
Green Green List (high evidence)
DDC
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Aromatic L-amino acid decarboxylase deficiency MIM# 608643
Tags
Green Green List (high evidence)
DDHD2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Spastic paraplegia 54, autosomal recessive MIM# 615033
Tags
Green Green List (high evidence)
DDX3X
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Intellectual developmental disorder, X-linked, syndrome, Snijders Blok type MIM# 300958
Tags
Green Green List (high evidence)
DOCK6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Adams-Oliver syndrome 2 MIM#614219
Tags
Green Green List (high evidence)
DYNC1H1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cortical dysplasia, complex MIM#614563
Tags
Green Green List (high evidence)
DYRK1A
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder MIM#614104
Tags
Green Green List (high evidence)
EARS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Combined oxidative phosphorylation deficiency 12 MIM# 614924
Tags
Green Green List (high evidence)
ECHS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Mitochondrial short-chain enoyl-CoA hydratase 1 deficiency MIM# 616277
Tags
Green Green List (high evidence)
ELOVL1
2 reviews
2 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facies, MIM# 618527
Tags
Green Green List (high evidence)
ELP2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder MIM#617270
Tags
Green Green List (high evidence)
ERCC8
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cockayne syndrome MIM#216400
Tags
Green Green List (high evidence)
ESAM
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with intracranial hemorrhage, seizures, and spasticity MIM#620371
Tags
Green Green List (high evidence)
EXOSC3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pontocerebellar hypoplasia MIM#614678
Tags
Green Green List (high evidence)
FAR1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cataracts, spastic paraparesis, and speech delay MIM#619338
Tags
Green Green List (high evidence)
FARS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Combined oxidative phosphorylation deficiency MIM#614946
  • 3 Spastic paraplegia MIM#617046
Tags
Green Green List (high evidence)
FBXO31
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cerebral palsy, MONDO:0006497, FBXO31-related
Tags
Green Green List (high evidence)
FH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Fumarase deficiency MIM#606812
Tags
Green Green List (high evidence)
FOXG1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Rett syndrome, congenital variant MIM# 613454
Tags
Green Green List (high evidence)
GCDH
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Glutaric aciduria, type I MIM#231670
Tags
Green Green List (high evidence)
GCH1
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dystonia, DOPA-responsive, MIM#128230
  • Hyperphenylalaninemia, BH4-deficient, B, MIM#233910
Tags
Green Green List (high evidence)
GNAO1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Neurodevelopmental disorder with involuntary movements MIM# 617493
Tags
Green Green List (high evidence)
GNB1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Mental retardation, autosomal dominant 42 MIM# 616973
Tags
Green Green List (high evidence)
GRIN1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant MIM#614254 AD
Tags
Green Green List (high evidence)
GRIN2B
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Developmental and epileptic encephalopathy 27 MIM# 616139
  • Intellectual developmental disorder, autosomal dominant 6, with or without seizures MIM# 613970
Tags
Green Green List (high evidence)
HECW2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy
  • Neurodevelopmental disorder with hypotonia, seizures, and absent language MIM# 617268
Tags
Green Green List (high evidence)
HPDL
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities, MIM# 619026
  • Spastic paraplegia 83, autosomal recessive, MIM# 619027
Tags
Green Green List (high evidence)
HPRT1
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hyperuricemia, HRPT-related MIM#300323
  • Lesch-Nyhan syndrome MIM#300322
Tags
Green Green List (high evidence)
IFIH1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Aicardi-Goutieres syndrome 7 MIM#615846
Tags
Green Green List (high evidence)
IRF2BPL
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures MIM#618088
Tags
Green Green List (high evidence)
ITPR1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 29, congenital nonprogressive MIM#117360
Tags
Green Green List (high evidence)
KAT6A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Arboleda-Tham syndrome MIM#616268
Tags
Green Green List (high evidence)
KCNB1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy MIM#616056
Tags
Green Green List (high evidence)
KCNC3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 13, MIM# 605259
Tags
Green Green List (high evidence)
KCNQ2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 7 - #613720
Tags
Green Green List (high evidence)
KCNT1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy MIM#614959
Tags
Green Green List (high evidence)
KDM5C
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Intellectual developmental disorder, X-linked syndromic, Claes-Jensen type MIM# 300534
  • MONDO:0010355
Tags
Green Green List (high evidence)
KIDINS220
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Literature
Phenotypes
  • Spastic paraplegia, intellectual disability, nystagmus, and obesity - #617296
  • Ventriculomegaly and arthrogryposis - #619501
Tags
Green Green List (high evidence)
KIF1A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spastic paraplegia 30, autosomal dominant, MIM# 610357
Tags
Green Green List (high evidence)
KMT2A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Literature
Phenotypes
  • Wiedemann-Steiner syndrome - #605130
Tags
Green Green List (high evidence)
KMT2B
3 reviews
2 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dystonia 28, childhood-onset MIM#617284
  • Intellectual developmental disorder, autosomal dominant MIM#619934
Tags
Green Green List (high evidence)
L1CAM
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • CRASH syndrome, MIM# 303350
Tags
Green Green List (high evidence)
MAP2K1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cardiofaciocutaneous syndrome MIM#615279
Tags
Green Green List (high evidence)
MCOLN1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Mucolipidosis IV MIM#252650
Tags
Green Green List (high evidence)
MECP2
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
  • Literature
Phenotypes
  • Encephalopathy, neonatal severe - 300673
  • Intellectual developmental disorder, X-linked syndromic, Lubs type - 300260
  • Intellectual developmental disorder, X-linked, syndromic 13 - 300055
  • Rett syndrome - 312750
Tags
Green Green List (high evidence)
MEF2C
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with hypotonia, stereotypic hand movements, and impaired language MIM#613443
Tags
Green Green List (high evidence)
MINPP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pontocerebellar hypoplasia, type 16, MIM# 619527
Tags
Green Green List (high evidence)
MOCS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Molybdenum cofactor deficiency B MIM#252160
Tags
Green Green List (high evidence)
MSL3
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Basilicata-Akhtar syndrome MIM#301032
Tags
Green Green List (high evidence)
MT-TL1
2 reviews
1 green
MITOCHONDRIAL
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • MELAS MIM#540000
Tags
  • mtDNA
Green Green List (high evidence)
NAA10
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ogden syndrome MIM#300855
Tags
Green Green List (high evidence)
NDUFAF2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cerebral palsy
  • Mitochondrial complex I deficiency nuclear type 10 (OMIM 618233)
Tags
Green Green List (high evidence)
NGLY1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Congenital disorder of deglycosylation (OMIM 615273)
Tags
Green Green List (high evidence)
NKX2-1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Choreoathetosis, hypothyroidism, and neonatal respiratory distress, MIM# 610978
Tags
Green Green List (high evidence)
NSRP1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Epilepsy
  • Cerebral palsy
  • microcephaly
  • Intellectual disability
Tags
Green Green List (high evidence)
NT5C2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spastic paraplegia 45, autosomal recessive, MIM# 613162
Tags
Green Green List (high evidence)
PAFAH1B1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Lissencephaly MIM#607432
  • Subcortical laminar heterotopia MIM#607432
Tags
Green Green List (high evidence)
PAK3
2 reviews
1 green 1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Intellectual developmental disorder, X-linked 30, MIM# 300558
Tags
Green Green List (high evidence)
PANK2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • HARP syndrome ( OMIM 607236)
  • Neurodegeneration with brain iron accumulation 1 (OMIM 234200)
Tags
Green Green List (high evidence)
PCDH12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Diencephalic-mesencephalic junction dysplasia syndrome 1 (OMIM 251280)
Tags
Green Green List (high evidence)
PCYT2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Spastic paraplegia 82, autosomal recessive 618770
Tags
Green Green List (high evidence)
PDHA1
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pyruvate dehydrogenase E1-alpha deficiency MIM#312170
Tags
Green Green List (high evidence)
PDHX
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Lacticacidemia due to PDX1 deficiency MIM#245349
Tags
Green Green List (high evidence)
PHIP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Chung-Jansen syndrome, MIM#617991
Tags
Green Green List (high evidence)
PIGA
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Multiple congenital anomalies-hypotonia-seizures syndrome 2 MIM#300868
  • Neurodevelopmental disorder with epilepsy and haemochromatosis MIM#301072
Tags
Green Green List (high evidence)
PIGN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Multiple congenital anomalies-hypotonia-seizures syndrome 1 (OMIM 614080)
Tags
Green Green List (high evidence)
PLA2G6
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodegeneration with brain iron accumulation 2B MIM#610217
Tags
Green Green List (high evidence)
PLP1
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spastic paraplegia 2, X-linked MIM#312920
Tags
Green Green List (high evidence)
POMGNT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 3 MIM# 253280
  • Muscular dystrophy-dystroglycanopathy (congenital with impaired intellectual development), type B, 3 MIM#613151
  • Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 3 MIM#613157
Tags
Green Green List (high evidence)
PROC
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Thrombophilia 3 due to protein C deficiency MIM#176860
  • Thrombophilia 3 due to protein C deficiency MIM#612304
Tags
Green Green List (high evidence)
PRUNE1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with microcephaly, hypotonia, and variable brain anomalies MIM#617481
Tags
Green Green List (high evidence)
PURA
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with neonatal respiratory insufficiency, hypotonia, and feeding difficulties (OMIM 616158)
Tags
Green Green List (high evidence)
RAB3GAP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Martsolf syndrome 2 MIM#619420
  • Warburg micro syndrome MIM#600118
Tags
Green Green List (high evidence)
RARS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pontocerebellar hypoplasia, type 6 MIM#611523
Tags
Green Green List (high evidence)
RNASEH2A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Aicardi-Goutieres syndrome 4
  • OMIM #610333
Tags
Green Green List (high evidence)
RNASEH2B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Aicardi-Goutieres syndrome 2
  • OMIM #610181
Tags
Green Green List (high evidence)
RNASEH2C
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Aicardi-Goutieres syndrome 3
  • OMIM #610329
Tags
Green Green List (high evidence)
SACS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spastic ataxia, Charlevoix-Saguenay type MIM#270550
Tags
  • SV/CNV
Green Green List (high evidence)
SAMHD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Aicardi-Goutieres syndrome 5
  • OMIM #612952
Tags
Green Green List (high evidence)
SATB2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Glass syndrome MIM#612313
Tags
Green Green List (high evidence)
SCN1A
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 6B, non-Dravet (OMIM 619317)
  • Dravet syndrome (OMIM 607208)
Tags
Green Green List (high evidence)
SCN2A
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 11 (DEE11), MIM# 613721
Tags
Green Green List (high evidence)
SCN8A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cerebral Palsy
  • Epileptic encephalopathy 13 MIM# 614558
  • Cognitive impairment with or without cerebellar ataxia MIM# 614306
Tags
Green Green List (high evidence)
SEPSECS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pontocerebellar hypoplasia type 2D MIM#613811
Tags
Green Green List (high evidence)
SLC16A2
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Allan-Herndon-Dudley syndrome MIM#300523
Tags
Green Green List (high evidence)
SLC2A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • GLUT1 deficiency syndrome 1, infantile onset, severe, 606777
  • GLUT1 deficiency syndrome 2, childhood onset, 612126
  • Disorders of glucose transport
Tags
Green Green List (high evidence)
SLC5A6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Parkinsonism-dystonia, infantile, 1 MIM#613135
Tags
Green Green List (high evidence)
SLITRK2
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder, X-linked MIM#301107
Tags
Green Green List (high evidence)
SPAST
3 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral Palsy (PMID:32989326)
Tags
Green Green List (high evidence)
SPATA5
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with hearing loss, seizures, and brain abnormalities MIM#616577
Tags
  • new gene name
Green Green List (high evidence)
SPATA5L1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with hearing loss and spasticity, MIM# 619616
Tags
Green Green List (high evidence)
SPG11
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spastic paraplegia 11, autosomal recessive, MIM# 604360
Tags
Green Green List (high evidence)
SPR
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dystonia, dopa-responsive, due to sepiapterin reductase deficiency MIM#612716
Tags
Green Green List (high evidence)
SPTAN1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 5
  • OMIM #613477
  • Hereditary spastic paraplegia MONDO:0019064, SPTAN1-related
  • Autosomal dominant spastic paraplegia-91, with or without cerebellar ataxia (SPG91), MIM#620538
Tags
Green Green List (high evidence)
SPTBN2
2 reviews
2 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spinocerebellar ataxia 5 MIM#600224
  • Spinocerebellar ataxia, autosomal recessive 14 MIM#615386
Tags
Green Green List (high evidence)
ST3GAL5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Salt and pepper developmental regression syndrome MIM#609056
Tags
Green Green List (high evidence)
STAMBP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Microcephaly-capillary malformation syndrome MIM#614261
Tags
Green Green List (high evidence)
STXBP1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Developmental and epileptic encephalopathy 4, MIM# 612164
Tags
Green Green List (high evidence)
SUOX
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Sulfite oxidase deficiency MIM#272300
Tags
Green Green List (high evidence)
SYNGAP1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 5 MIM#612621
Tags
Green Green List (high evidence)
TAF1
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder, X-linked syndromic 33, OMIM #300966
  • Dystonia-Parkinsonism, X-linked, OMIM #314250
Tags
Green Green List (high evidence)
TCF4
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Pitt-Hopkins syndrome, MIM# 610954
Tags
Green Green List (high evidence)
TH
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Segawa syndrome, recessive MIM#605407
Tags
Green Green List (high evidence)
TMX2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with microcephaly, cortical malformations, and spasticity MIM#618730
Tags
Green Green List (high evidence)
TNR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Neurodevelopmental disorder, nonprogressive, with spasticity and transient opisthotonus, MIM# 619653
  • Spastic para- or tetraparesis
  • Axial muscular hypotonia
  • Intellectual disability
  • Transient opisthotonus
Tags
Green Green List (high evidence)
TRAPPC9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal recessive MIM#13 613192
Tags
Green Green List (high evidence)
TREX1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Aicardi-Goutieres syndrome 1, dominant and recessive, OMIM #225750
Tags
Green Green List (high evidence)
TUBA1A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Lissencephaly 3, MIM# 611603
  • Cerebral palsy
Tags
Green Green List (high evidence)
TUBB2A
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cortical dysplasia, complex, with other brain malformations MIM# 615763
Tags
Green Green List (high evidence)
TUBB2B
3 reviews
2 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cortical dysplasia, complex, with other brain malformations 7, OMIM # 610031
Tags
Green Green List (high evidence)
TUBB3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cortical dysplasia, complex, with other brain malformations MIM#614039
Tags
Green Green List (high evidence)
TUBB4A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dystonia 4, torsion, autosomal dominant, OMIM #128101
  • Leukodystrophy, hypomyelinating, 6, OMIM # 612438
Tags
Green Green List (high evidence)
UBE3A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Angelman syndrome , OMIM #105830
Tags
Green Green List (high evidence)
VPS13D
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 4, MIM# 607317
Tags
Green Green List (high evidence)
WDR26
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Skraban-Deardorff syndrome MIM#617616
Tags
Green Green List (high evidence)
WDR45
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodegeneration with brain iron accumulation 5, OMIM # 300894
Tags
Green Green List (high evidence)
WWOX
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy MIM#616211
  • Spinocerebellar ataxia MIM#6143223
Tags
Green Green List (high evidence)
ZC4H2
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Wieacker-Wolff syndrome, MIM# 314580
Tags
Green Green List (high evidence)
ZEB2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Mowat-Wilson syndrome, OMIM # 235730
Tags
Green Green List (high evidence)
ZSWIM6
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features, OMIM #617865
Tags
Amber Amber List (moderate evidence)
AGAP1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Cerebral palsy, MONDO:0006497, AGAP1-related
Tags
  • SV/CNV
Amber Amber List (moderate evidence)
ALK
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Spastic-dystonic diplegia
Tags
Amber Amber List (moderate evidence)
ARSA
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Metachromatic leukodystrophy, MIM#250100
Tags
Amber Amber List (moderate evidence)
B4GALNT1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Spastic paraplegia 26, autosomal recessive, MIM#609195
Tags
Amber Amber List (moderate evidence)
BRAF
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Cardiofaciocutaneous syndrome, MIM#115150
Tags
Amber Amber List (moderate evidence)
BRAT1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neurodevelopmental disorder with cerebellar atrophy and with or without seizures MIM#618056
  • neonatal lethal rigidity and multifocal seizure syndrome MIM#614498
Tags
Amber Amber List (moderate evidence)
CACNA1D
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Primary aldosteronism, seizures and neurologic abnormalities
  • PASNA, MIM#615474
Tags
Amber Amber List (moderate evidence)
CDKL5
2 reviews
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 2, MIM# 300672
Tags
Amber Amber List (moderate evidence)
CHD7
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • CHARGE syndrome, MIM#608892
Tags
Amber Amber List (moderate evidence)
CTBP1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Hypotonia, ataxia, developmental delay, and tooth enamel defect syndrome MIM#617915
Tags
Amber Amber List (moderate evidence)
DHPS
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neurodevelopmental disorder with seizures and speech and walking impairment (NEDSSWI), MIM#618480
Tags
Amber Amber List (moderate evidence)
DHX32
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neurodevelopmental disorder, MONDO:0700092, DHX32-related
Tags
Amber Amber List (moderate evidence)
EEF1A2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy MIM#616409
Tags
Amber Amber List (moderate evidence)
FRRS1L
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy MIM#616981
Tags
Amber Amber List (moderate evidence)
GABRB2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy MIM#617829
Tags
Amber Amber List (moderate evidence)
GALC
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Krabbe disease, MIM#245200
Tags
Amber Amber List (moderate evidence)
GSX2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Diencephalic-mesencephalic junction dysplasia syndrome 2 618646
  • Intellectual disability
  • Dystonia
  • Spastic tetra paresis
Tags
Amber Amber List (moderate evidence)
HCFC1
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Methylmalonic aciduria and homocysteinemia, cblX type, MIM#309541
Tags
Amber Amber List (moderate evidence)
HUWE1
2 reviews
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Intellectual developmental disorder, X-linked syndromic, Turner type MIM#309590
Tags
Amber Amber List (moderate evidence)
IQSEC2
3 reviews
1 green 1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Intellectual developmental disorder MIM#309530
Tags
Amber Amber List (moderate evidence)
MAPK8IP3
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neurodevelopmental disorder with or without variable brain abnormalities, MIM#618443
Tags
Amber Amber List (moderate evidence)
MAST1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Mega-corpus-callosum syndrome with cerebellar hypoplasia and cortical malformations MIM#618273
Tags
Amber Amber List (moderate evidence)
MCCC2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • 3-Methylcrotonyl-CoA carboxylase 2 deficiency, MIM#210210
Tags
Amber Amber List (moderate evidence)
MED12
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Opitz-Kaveggia syndrome, MIM#305450
Tags
Amber Amber List (moderate evidence)
MMACHC
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Methylmalonic aciduria and homocystinuria, cblC type, MIM#277400
Tags
Amber Amber List (moderate evidence)
MOCS1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Molybdenum cofactor deficiency A MIM#252150
Tags
Amber Amber List (moderate evidence)
NALCN
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Cerebral palsy
  • Congenital contractures of the limbs and face, hypotonia, and developmental delay (OMIM 616266)
Tags
Amber Amber List (moderate evidence)
NDUFA12
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Spastic tetraparesis
  • intellectual disability
  • encephalopathy
Tags
Amber Amber List (moderate evidence)
NFIX
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Malan syndrome MIM#614753
  • Marshall-Smith syndrome MIM#602535
Tags
Amber Amber List (moderate evidence)
PIK3R2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 1, MIM#603387
Tags
Amber Amber List (moderate evidence)
PNPLA6
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Spastic paraplegia 39 MIM#612020
Tags
Amber Amber List (moderate evidence)
POGZ
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • White-Sutton syndrome MIM#616364
Tags
Amber Amber List (moderate evidence)
POLA1
1 review
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Van Esch-O'Driscoll syndrome, MIM#301030
Tags
Amber Amber List (moderate evidence)
POLG
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Mitochondrial DNA depletion syndrome 4a, MIM#203700, Mitochondrial DNA Depletion Syndrome 4B, MIM#613662, Mitochondrial recessive ataxia syndrome (includes SANDO and SCAE), MIM#607459
Tags
Amber Amber List (moderate evidence)
PTPN11
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • LEOPARD syndrome 1 MIM#151100
  • Noonan syndrome MIM#163950
Tags
Amber Amber List (moderate evidence)
PTPN23
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neurodevelopmental disorder and structural brain anomalies with or without seizures and spasticity MIM#618890
Tags
Amber Amber List (moderate evidence)
REPS2
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • Other
Phenotypes
  • complex neurodevelopmental disorder MONDO:0100038
  • Cerebral palsy HP:0100021
Tags
Amber Amber List (moderate evidence)
RHOB
1 review
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review
  • Expert Review Amber
Phenotypes
  • Cerebral Palsy (PMID:32989326)
Tags
Amber Amber List (moderate evidence)
RNU7-1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Aicardi-Goutières syndrome 9, MIM#619487
Tags
Amber Amber List (moderate evidence)
SETD2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 70, MIM#620157
  • Luscan-Lumish syndrome, MIM#61683
  • Rabin-Pappas syndrome, MIM#620155
Tags
Amber Amber List (moderate evidence)
SHANK3
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Phelan-McDermid syndrome, MIM# 606232
Tags
Amber Amber List (moderate evidence)
SLC13A5
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 25, with amelogenesis imperfecta MIM#615905
Tags
Amber Amber List (moderate evidence)
SLC1A2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 41, MIM#617105
Tags
Amber Amber List (moderate evidence)
SMARCB1
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Coffin-Siris syndrome 3, MIM# 614608
Tags
Amber Amber List (moderate evidence)
SNX14
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 20 MIM#616354
Tags
Amber Amber List (moderate evidence)
SON
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • ZTTK syndrome MIM#617140
Tags
Amber Amber List (moderate evidence)
SYNE1
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Spinocerebellar ataxia, autosomal recessive 8 MIM#610743
Tags
Amber Amber List (moderate evidence)
TANGO2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration MIM#616878
Tags
Amber Amber List (moderate evidence)
TEP1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Cerebral palsy, MONDO:0006497, TEP1-related
Tags
Amber Amber List (moderate evidence)
THOC2
2 reviews
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Intellectual developmental disorder, X-linked 12, MIM#300957
Tags
Amber Amber List (moderate evidence)
TSC1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Tuberous sclerosis-1 MIM#191100
Tags
Amber Amber List (moderate evidence)
ZDHHC9
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Intellectual developmental disorder, X-linked syndromic, Raymond type, MIM#300799
Tags
Red Red List (low evidence)
ABCD1
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Adrenoleukodystrophy, MIM#300100
Tags
Red Red List (low evidence)
ABHD16A
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Spastic paraplegia 86, autosomal recessive, MIM#619735
Tags
Red Red List (low evidence)
ACAD9
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Mitochondrial complex I deficiency, nuclear type 20, MIM#611126
Tags
Red Red List (low evidence)
AKT3
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 2, MIM# 615937
Tags
Red Red List (low evidence)
ALDH7A1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Epilepsy, pyridoxine-dependent, MIM#266100
Tags
Red Red List (low evidence)
ARHGEF9
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 8, MIM#300607
Tags
Red Red List (low evidence)
ARID1B
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Coffin-Siris syndrome 1, MIM#135900
Tags
Red Red List (low evidence)
ARMC9
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Joubert syndrome 30, MIM#617622
Tags
Red Red List (low evidence)
ASL
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Argininosuccinic aciduria, MIM#207900
Tags
Red Red List (low evidence)
ASPA
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Canavan disease, MIM#271900
Tags
Red Red List (low evidence)
ATP1A2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Alternating hemiplegia of childhood 1, MIM#104290
Tags
Red Red List (low evidence)
ATP6V1A
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 93, MIM#618012
Tags
Red Red List (low evidence)
ATP7B
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Wilson disease MIM#277900
Tags
Red Red List (low evidence)
ATR
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Seckel syndrome, MIM#210600
Tags
Red Red List (low evidence)
BSCL2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Spastic paraplegia 17, MIM#270685
Tags
Red Red List (low evidence)
CACNA1B
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Neurodevelopmental disorder with seizures and nonepileptic hyperkinetic movements, MIM#618497
Tags
Red Red List (low evidence)
CAMK2B
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 54, MIM#617799
Tags
Red Red List (low evidence)
CAMK2G
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 59, MIM#618522
Tags
Red Red List (low evidence)
CCDC22
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Ritscher-Schinzel syndrome 2, MIM#300963
Tags
Red Red List (low evidence)
CEP290
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Joubert syndrome 5, MIM#610188
Tags
Red Red List (low evidence)
CHCHD10
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Myopathy, isolated mitochondrial, MIM#616209
Tags
Red Red List (low evidence)
CHD3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Snijders Blok-Campeau syndrome, MIM#618205
Tags
Red Red List (low evidence)
CHD4
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Sifrim-Hitz-Weiss syndrome, MIM#617159
Tags
Red Red List (low evidence)
CLCN4
2 reviews
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Raynaud-Claes syndrome MIM#300114
Tags
Red Red List (low evidence)
CLCN7
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypopigmentation, organomegaly, and delayed myelination and development, MIM#175780
  • Osteopetrosis, autosomal recessive 4
  • OPTB4, MIM#602727
Tags
Red Red List (low evidence)
CLN6
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Neuronal Ceroid Lipofuscinosis 6, MIM#601780
Tags
Red Red List (low evidence)
COL6A3
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Dystonia 27, MIM#616411
Tags
Red Red List (low evidence)
COQ4
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Coenzyme Q10 deficiency, primary, MIM#616276
  • Spastic ataxia 10, autosomal recessive, MIM#620666
Tags
Red Red List (low evidence)
CTCF
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 21, MIM#615502
Tags
Red Red List (low evidence)
CUL3
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Neurodevelopmental disorder with or without autism or seizures, MIM#619239, Pseudohypoaldosteronism, type IIE, MIM#614496
Tags
Red Red List (low evidence)
CYFIP2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 65, MIM#618008
Tags
Red Red List (low evidence)
DCC
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Mirror movements 1 and/or agenesis of the corpus callosum, MIM#157600
Tags
Red Red List (low evidence)
DDX59
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Orofaciodigital syndrome V, MIM#174300
Tags
Red Red List (low evidence)
DHCR7
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Smith-Lemli-Opitz syndrome, MIM#270400
Tags
Red Red List (low evidence)
DIAPH1
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Seizures, cortical blindness, and microcephaly syndrome, MIM#616632
Tags
Red Red List (low evidence)
DLG4
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 62, MIM#618793
Tags
Red Red List (low evidence)
DNM2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Charcot-Marie-Tooth disease, axonal type 2M, MIM#606482
Tags
Red Red List (low evidence)
DNMT3A
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Heyn-Sproul-Jackson syndrome, MIM#618724
  • Tatton-Brown-Rahman syndrome, MIM#615879
Tags
Red Red List (low evidence)
DUOX2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Thyroid dyshormonogenesis 6, MIM#607200
Tags
Red Red List (low evidence)
EBF3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypotonia, ataxia and delayed development syndrome MIM#617330
Tags
Red Red List (low evidence)
EBP
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • MEND syndrome, MIM#300960
Tags
Red Red List (low evidence)
EHMT1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Kleefstra syndrome, MIM#610253
Tags
Red Red List (low evidence)
EPG5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Vici syndrome, MIM#242840
Tags
Red Red List (low evidence)
ERLIN2
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Spastic paraplegia 18A, autosomal dominant, MIM#620512
  • Spastic paraplegia 18B, autosomal recessive, MIM#611225
Tags
Red Red List (low evidence)
EZH2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Weaver syndrome, MIM#277590
Tags
Red Red List (low evidence)
FAM126A
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Leukodystrophy, hypomyelinating MIM#610532
Tags
Red Red List (low evidence)
FAM20C
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Raine syndrome, MIM#259775
Tags
Red Red List (low evidence)
FGD1
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Aarskog-Scott syndrome
  • Intellectual developmental disorder, X-linked syndromic 16, MIM#305400
Tags
Red Red List (low evidence)
FGFR1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hartsfield syndrome, MIM#615465
Tags
Red Red List (low evidence)
FLNA
2 reviews
1 green 1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Heterotopia, periventricular, 1, MIM#300049
Tags
Red Red List (low evidence)
FUS
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Essential tremor, MIM#614782
Tags
Red Red List (low evidence)
GABBR2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 59, MIM#617904
  • Neurodevelopmental disorder with poor language and loss of hand skills, MIM#617903
Tags
Red Red List (low evidence)
GABRB1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy MIM#617153
Tags
Red Red List (low evidence)
GAD1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cerebral palsy, spastic quadriplegic, 1, MIM#603513
Tags
Red Red List (low evidence)
GAMT
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Cerebral creatine deficiency syndrome 2, MIM#612736
Tags
Red Red List (low evidence)
GATAD2B
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • GAND syndrome, MIM#615076
Tags
Red Red List (low evidence)
GBA
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Gaucher disease, MIM#231000
Tags
Red Red List (low evidence)
GFAP
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Alexander disease, MIM#203450
Tags
Red Red List (low evidence)
GRIN2A
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Epilepsy, focal, with speech disorder and with or without impaired intellectual development, MIM#245570
Tags
Red Red List (low evidence)
HIVEP2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 43, MIM#616977
Tags
Red Red List (low evidence)
HPCA
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
Phenotypes
  • Dystonia 2, torsion, autosomal recessive, MIM#224500
Tags
Red Red List (low evidence)
HSPD1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Leukodystrophy, hypomyelinating, 4, MIM#612233
Tags
Red Red List (low evidence)
IREB2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Neurodegeneration, early-onset, with choreoathetoid movements and microcytic anemia, MIM#618451
Tags
Red Red List (low evidence)
KANK1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cerebral palsy, spastic quadriplegic, 2, MIM#612900
Tags
Red Red List (low evidence)
KAT6B
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • SBBYSS syndrome, MIM#603736
  • Genitopatellar syndrome, MIM#606170
Tags
Red Red List (low evidence)
KCNH1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Temple-Baraitser syndrome, MIM#611816
  • Zimmermann-Laband syndrome 1, MIM#135500
Tags
Red Red List (low evidence)
KCNK9
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Birk-Barel syndrome (KCNK9 imprinting syndrome), MIM#612292
Tags
Red Red List (low evidence)
KCNQ3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Seizures, benign neonatal, 2, MIM#121201
Tags
Red Red List (low evidence)
KCNQ5
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 46, MIM#617601
Tags
Red Red List (low evidence)
KDM3B
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Diets-Jongmans syndrome, MIM#618846
Tags
Red Red List (low evidence)
KDM7A
1 review
1 red
Unknown
Sources
  • Expert list
  • Expert Review Red
  • Literature
Phenotypes
  • Cerebral palsy
Tags
Red Red List (low evidence)
KIAA1109
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Alkuraya-Kucinskas syndrome, MIM#617822
Tags
Red Red List (low evidence)
KIF14
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Microcephaly 20, primary, MIM#617914
Tags
Red Red List (low evidence)
KIF5C
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Cortical dysplasia, complex, with other brain malformations 2 MIM#615282
Tags
Red Red List (low evidence)
KMT2D
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Kabuki syndrome 1, MIM#147920
Tags
Red Red List (low evidence)
LAMA1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Poretti-Boltshauser syndrome, MIM#615960
Tags
Red Red List (low evidence)
LRP2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Donnai-Barrow syndrome, MIM#222448
Tags
Red Red List (low evidence)
LZTR1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Noonan syndrome 2, MIM#605275
Tags
Red Red List (low evidence)
MACF1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Lissencephaly 9 with complex brainstem malformation, MIM#618325
Tags
Red Red List (low evidence)
MAOB
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Cerebral palsy
Tags
Red Red List (low evidence)
MBD5
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 1, MIM#156200
Tags
Red Red List (low evidence)
MED13L
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Impaired intellectual development and distinctive facial features with or without cardiac defects, OMIM#616789
Tags
Red Red List (low evidence)
MFN2
3 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Charcot-Marie-Tooth disease, axonal, type 2A2A - #609260
  • Charcot-Marie-Tooth disease, axonal, type 2A2B - #617087
  • Hereditary motor and sensory neuropathy VIA - 601152
Tags
Red Red List (low evidence)
MLC1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Megalencephalic leukoencephalopathy with subcortical cysts MIM#604004
Tags
Red Red List (low evidence)
MUT
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Methylmalonic aciduria, MIM#251000
Tags
Red Red List (low evidence)
MYH2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Congenital myopathy 6 with ophthalmoplegia, MIM#605637
Tags
Red Red List (low evidence)
MYO9A
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Myasthenic syndrome, congenital, 24, presynaptic, MIM#618198
Tags
Red Red List (low evidence)
NEFL
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Charcot-Marie-Tooth disease, dominant intermediate G, MIM#617882
Tags
Red Red List (low evidence)
NEXMIF
1 review
1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Red
Phenotypes
  • X-linked Intellectual disability
  • epilepsy
  • autism
Tags
Red Red List (low evidence)
NFE2L2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immunodeficiency, developmental delay, and hypohomocysteinemia , MIM#617744
Tags
Red Red List (low evidence)
NFIB
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Macrocephaly, acquired, with impaired intellectual development, MIM#618286
Tags
Red Red List (low evidence)
NOTCH1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Adams-Oliver syndrome 5, MIM#616028
Tags
Red Red List (low evidence)
NR2F1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Bosch-Boonstra-Schaaf optic atrophy syndrome, MIM#615722
  • NR2F1-related neurodevelopmental disorder
Tags
Red Red List (low evidence)
NSD1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Sotos syndrome, MIM#117550
Tags
Red Red List (low evidence)
NSD2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Rauch-Steindl syndrome, MIM#619695
Tags
Red Red List (low evidence)
OPHN1
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, X-linked syndromic, Billuart type, MIM#300486
Tags
Red Red List (low evidence)
PACS1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Schuurs-Hoeijmakers syndrome, MIM#615009
Tags
Red Red List (low evidence)
PCDH19
1 review
1 red
Other
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 9 (OMIM 300088)
Tags
Red Red List (low evidence)
PCLO
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Pontocerebellar hypoplasia, type 3, MIM#608027
Tags
Red Red List (low evidence)
PDE10A
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Dyskinesia, limb and orofacial, infantile-onset, autosomal recessive, MIM#616921
  • Striatal degeneration, autosomal dominant, MIM#616922
Tags
Red Red List (low evidence)
PGAP2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hyperphosphatasia with impaired intellectual development syndrome 3, MIM#614207
Tags
Red Red List (low evidence)
PHF6
1 review
1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Borjeson-Forssman-Lehmann syndrome, MIM#301900
Tags
Red Red List (low evidence)
PHKA2
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Glycogen storage disease, type IXa, 306000
Tags
Red Red List (low evidence)
PIDD1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly, MIM#619827
Tags
Red Red List (low evidence)
PIK3CA
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Megalencephaly-capillary malformation-polymicrogyria syndrome, somatic, MIM#602501
Tags
Red Red List (low evidence)
PMM2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Congenital disorder of glycosylation, type Ia MIM#212065
Tags
Red Red List (low evidence)
POLR2A
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Neurodevelopmental disorder with hypotonia and variable intellectual and behavioral abnormalities, MIM#618603
Tags
Red Red List (low evidence)
PPM1D
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Jansen-de Vries syndrome, MIM#617450
Tags
Red Red List (low evidence)
PQBP1
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Renpenning syndrome, MIM#309500
Tags
Red Red List (low evidence)
PUM1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Neurodevelopmental disorder with motor abnormalities, seizures, and facial dysmorphism, MIM#620719
  • Spinocerebellar ataxia 47, MIM#617931
Tags
Red Red List (low evidence)
RARB
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Microphthalmia, syndromic 12, MIM#615524
Tags
Red Red List (low evidence)
ROGDI
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Kohlschutter-Tonz syndrome, MIM#226750
Tags
Red Red List (low evidence)
RTN4IP1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Optic atrophy 10 with or without ataxia, impaired intellectual development, and seizures, MIM#616732
Tags
Red Red List (low evidence)
RTTN
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Microcephaly, short stature, and polymicrogyria with seizures, MIM#614833
Tags
Red Red List (low evidence)
SETBP1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 29, MIM#616078
  • Schinzel-Giedion midface retraction syndrome, MIM#269150
Tags
Red Red List (low evidence)
SGCE
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Dystonia-11, myoclonic, MIM#159900
Tags
Red Red List (low evidence)
SIK1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 30, MIM#616341
Tags
Red Red List (low evidence)
SLC25A12
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 39, MIM#612949
Tags
Red Red List (low evidence)
SLC35A2
1 review
1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Congenital disorder of glycosylation, type IIm, MIM#300896
Tags
Red Red List (low evidence)
SLC6A5
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hyperekplexia 3, MIM#614618
Tags
Red Red List (low evidence)
SMARCA2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Blepharophimosis-impaired intellectual development syndrome, MIM#619293
  • Nicolaides-Baraitser syndrome, MIM#601358
Tags
Red Red List (low evidence)
SMARCA4
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Coffin-Siris syndrome 4, MIM#614609
Tags
Red Red List (low evidence)
SMC1A
1 review
1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 85, with or without midline brain defects, MIM#301044
Tags
Red Red List (low evidence)
SMC3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Cornelia de Lange syndrome 3, MIM#610759
Tags
Red Red List (low evidence)
SMG8
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Alzahrani-Kuwahara syndrome, MIM#619268
Tags
Red Red List (low evidence)
SOX10
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • PCWH syndrome, MIM#609136
  • Waardenburg syndrome, type 2E, with or without neurologic involvement, MIM#611584
Tags
Red Red List (low evidence)
SOX2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Microphthalmia, syndromic 3
  • Optic nerve hypoplasia and abnormalities of the central nervous system, MIM#206900
Tags
Red Red List (low evidence)
TANC2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder with autistic features and language delay, with or without seizures, MIM#618906
Tags
Red Red List (low evidence)
TBCD
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum MIM#617193
Tags
Red Red List (low evidence)
TBCK
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypotonia, infantiale with psychomotor retardation and characteristic facies 3, MIM#616900
Tags
Red Red List (low evidence)
TBR1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder with autism and speech delay, MIM#606053
Tags
Red Red List (low evidence)
TBX6
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Spondylocostal dysostosis 5, MIM#122600
Tags
Red Red List (low evidence)
TENM1
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
TGM6
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Spinocerebellar ataxia 35, MIM#613908
Tags
Red Red List (low evidence)
TOR1A
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Dystonia-1, torsion, MIM#128100
Tags
Red Red List (low evidence)
TRIO
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 44, with microcephaly MIM#617061
Tags
Red Red List (low evidence)
TRIP12
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 49, MIM#617752
Tags
Red Red List (low evidence)
TRPM3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Neurodevelopmental disorder with hypotonia, dysmorphic facies, and skeletal anomalies, with or without seizures (NEDFSS), MIM#620224)
Tags
Red Red List (low evidence)
TSC2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Tuberous sclerosis-2, MIM#613254
Tags
Red Red List (low evidence)
TSEN54
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Pontocerebellar hypoplasia type 2, MIM#277470
Tags
Red Red List (low evidence)
TSHR
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hyperthyroidism, nonautoimmune, MIM#609152
Tags
Red Red List (low evidence)
TUBG1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Cortical dysplasia, complex, with other brain malformations 4, MIM#615412
Tags
Red Red List (low evidence)
VPS13B
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Cohen syndrome, MIM#216550
Tags
Red Red List (low evidence)
VPS53
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Pontocerebellar hypoplasia, type 2E, MIM#615851
Tags
Red Red List (low evidence)
WDR62
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Microcephaly 2, primary, autosomal recessive, with or without cortical malformations, MIM#604317
Tags
Red Red List (low evidence)
ZBTB18
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 22, MIM#612337
Tags
Red Red List (low evidence)
ZIC2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Holoprosencephaly, MIM#609637
Tags
Red Red List (low evidence)
ZMYM2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Neurodevelopmental-craniofacial syndrome with variable renal and cardiac abnormalities, MIM#619522
Tags
No list No list
TRIT1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Literature
Phenotypes
  • Combined oxidative phosphorylation deficiency 35, MIM#617873
Tags
No list No list
ZMYND11
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Literature
Phenotypes
  • Intellectual developmental disorder 30, MIM#616083
Tags

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