Description
This panel contains genes associated with soft tissue sarcoma.

Only ‘Green’ genes should be tested and analysed for clinical testing, as they have sufficient peer-reviewed published evidence of association with soft tissue sarcoma and are clinically actionable for diagnostic and/or predictive genetic testing.

Ensure testing includes copy number variant (CNV) analysis, as CNVs contribute to a clinically significant proportion of pathogenic variants associated with familial risk of cancer.

This panel has been compared against the Genomics England PanelApp and aligned with any assessments by ClinGen.

This panel has been developed under the guidance of experts in cancer genetics (Dr Helen Mar Fan and Dr Nicola Poplawski).

1 reviewer

  • Chirag Patel (Genetic Health Queensland)

17 Entities

17 reviewed, 16 green

List Entity Reviews Mode of inheritance Details
17 Entitiess
Green Green List (high evidence)
BRCA1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • BRCA1-related cancer predisposition, MONDO:0700268
  • Breast-ovarian cancer, familial, 1, MIM#604370
Tags
Green Green List (high evidence)
BRCA2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • BRCA2-related cancer predisposition, MONDO:0700269
  • Breast-ovarian cancer, familial, 2, MIM#612555
Tags
Green Green List (high evidence)
BUB1B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Mosaic variegated aneuploidy syndrome 1, MONDO:0009759
  • Mosaic variegated aneuploidy syndrome 1, MIM#257300
Tags
Green Green List (high evidence)
DICER1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • DICER1-related tumor predisposition, MONDO:0100216
  • DICER1 syndrome, MIM#601200
Tags
Green Green List (high evidence)
HRAS
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Costello syndrome, MONDO:0009026
  • Costello syndrome, MIM#218040
Tags
Green Green List (high evidence)
MLH1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Mismatch repair cancer syndrome 1, MONDO:0010159
  • Mismatch repair cancer syndrome 1, MIM#276300
Tags
Green Green List (high evidence)
MSH2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Mismatch repair cancer syndrome 2, MONDO:0030840
  • Mismatch repair cancer syndrome 2, MIM#619096
Tags
Green Green List (high evidence)
MSH6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Mismatch repair cancer syndrome 3, MONDO:0030841
  • Mismatch repair cancer syndrome 3, MIM#619097
Tags
Green Green List (high evidence)
NBN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Nijmegen breakage syndrome, MONDO:0009623
  • Nijmegen breakage syndrome, MIM#251260
Tags
Green Green List (high evidence)
NF1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Neurofibromatosis type 1, MONDO:0018975
  • Neurofibromatosis, type 1, MIM#162200
Tags
Green Green List (high evidence)
PMS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Mismatch repair cancer syndrome 4, MONDO:0030843
  • Mismatch repair cancer syndrome 4, MIM#619101
Tags
Green Green List (high evidence)
RB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Retinoblastoma, MONDO:0008380
  • Retinoblastoma, MIM#180200
Tags
Green Green List (high evidence)
SMARCA4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Rhabdoid tumor predisposition syndrome 2, MONDO:0013224
  • Rhabdoid tumor predisposition syndrome 2, MIM#613325
Tags
Green Green List (high evidence)
SMARCB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Rhabdoid tumor predisposition syndrome 1, MONDO:0012252
  • Rhabdoid tumor predisposition syndrome 1, MIM#609322
Tags
Green Green List (high evidence)
TP53
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Li-Fraumeni syndrome, MONDO:0018875
  • Li-Fraumeni syndrome, MIM#151623
Tags
Green Green List (high evidence)
WRN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review
  • Expert Review Green
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Werner syndrome, MONDO:0010196
  • Werner syndrome, MIM#277700
Tags
Amber Amber List (moderate evidence)
POT1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Amber
  • Literature
Phenotypes
  • Soft tissue sarcoma, MONDO:0018078
  • Sarcoma, MONDO:0005089
  • Tumor predisposition syndrome 3, MONDO:0014368
  • Melanoma, cutaneous malignant, MIM#606478
Tags

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