Ciliopathies
Gene: PRKCSHEnsemblGeneIds (GRCh38): ENSG00000130175
EnsemblGeneIds (GRCh37): ENSG00000130175
OMIM: 177060, Gene2Phenotype
PRKCSH is in 6 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Comment when marking as ready: Potential phenotypic overlap with ciliopathies.Created: 6 May 2020, 10:12 a.m. | Last Modified: 6 May 2020, 10:12 a.m.
Panel Version: 0.112
Crystle Lee (Victorian Clinical Genetics Services)
Not a ciliopathy gene.
PMID: 12529853; Li 2003: Reported 6 ADPLD families.
PMID: 19876928; Gunay-Aygun 2009: PRKCSH encodes for hepatocystin and is not ciliary proteins; involved in the ER processing of proteins
PMID: 21856269; Janssen 2011: 2 hit mechanism required for formation of cysts. Germline variant + LoH of PRKCSH, therefore is recessive at the cellular level.
UniProt: "Required for efficient Polycystin 1 biogenesis and trafficking to the plasma membrane of the primary cilia"Created: 6 May 2020, 1:08 a.m. | Last Modified: 6 May 2020, 1:08 a.m.
Panel Version: 0.103
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Polycystic liver disease 1 (MIM#174050)
Publications
Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Amber
- Victorian Clinical Genetics Services
- Phenotypes
-
- Polycystic liver disease 1 (MIM#174050)
- OMIM
- 177060
- Clinvar variants
- Variants in PRKCSH
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Other
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: prkcsh has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: PRKCSH were changed from to Polycystic liver disease 1 (MIM#174050)
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: PRKCSH were set to 19876928
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: PRKCSH were set to 19876928
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: PRKCSH were set to
Set mode of pathogenicity
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of pathogenicity for gene: PRKCSH was changed from to Other
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: PRKCSH was changed from Unknown to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: prkcsh has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: PRKCSH was added gene: PRKCSH was added to Ciliopathies_VCGS. Sources: Expert Review Green,Victorian Clinical Genetics Services Mode of inheritance for gene: PRKCSH was set to Unknown