1. Panels
  2. Ciliary Dyskinesia

Ciliary Dyskinesia (Version 1.40)

Level 2: Respiratory disorders

Relevant disorders: Ciliary dyskinesia HP:0012265;Recurrent respiratory infections HP:0002205
Panel types: Victorian Clinical Genetics Services, Royal Melbourne Hospital, Rare Disease
Description
This panel was developed and is maintained by VCGS. It contains conditions caused by defects in the motile cilia, primarily those presenting with respiratory phenotypes. It also contains a small number of other genes that cause conditions with significant phenotypic overlap.

This panel has been compared against the Genomics England PanelApp 'Respiratory Ciliopathies including non-CF bronchiectasis' panel V1.3, with all discrepancies resolved and reciprocal feedback provided to Genomics England.
Panel Activity

13 reviewers

  • Sebastian Lunke (Victorian Clinical Genetics Services)

  • Alison Yeung (Victorian Clinical Genetics Services)

  • Belinda Chong (Victorian Clinical Genetics Services)

  • Teresa Zhao (Victorian Clinical Genetics Services)

  • Ain Roesley (Victorian Clinical Genetics Services)

  • Chirag Patel (Genetic Health Queensland)

  • Achchuthan Shanmugasundram (Genomics England)

  • Sangavi Sivagnanasundram (Melbourne Health)

  • Crystle Lee (Victorian Clinical Genetics Services)

  • Elena Savva (Victorian Clinical Genetics Services)

  • Chern Lim (Victorian Clinical Genetics Services)

  • Jonathon Bradshaw (Victorian Clinical Genetics Services)

  • Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

74 Entities

74 reviewed, 51 green

List Entity Reviews Mode of inheritance Details
74 Entitiess
Green List (high evidence)
AGR2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Recurrent respiratory infections and failure to thrive with or without diarrhea (RIFTD), MIM#620233
Tags
Green List (high evidence)
ARMC4
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 23, MIM# 615451
Tags
  • new gene name
Green List (high evidence)
C11orf70
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Ciliary dyskinesia, primary, 38 618063
Tags
  • new gene name
Green List (high evidence)
C21orf59
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 26, MIM# 615500
Tags
  • founder
  • new gene name
Green List (high evidence)
CCDC103
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 17, MIM# 614679
Tags
  • founder
Green List (high evidence)
CCDC114
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 20, MIM# 615067
Tags
  • new gene name
Green List (high evidence)
CCDC151
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 30, MIM# 616037
Tags
  • new gene name
Green List (high evidence)
CCDC39
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 14, MIM# 613807
Tags
Green List (high evidence)
CCDC40
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 15, MIM#613808
Tags
Green List (high evidence)
CCDC65
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 27, MIM# 615504
Tags
  • founder
Green List (high evidence)
CCNO
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 29, MIM# 615872
Tags
Green List (high evidence)
CFAP43
2 reviews
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Hydrocephalus, normal pressure, 1 236690
  • Spermatogenic failure 19 617592
Tags
Green List (high evidence)
CFAP53
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Heterotaxy, visceral, 6, autosomal recessive 614779
Tags
Green List (high evidence)
CFTR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cystic fibrosis
  • bronchiectasis
Tags
Green List (high evidence)
DAW1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Primary ciliary dyskinesia, with or without heterotaxy, MIM#620570
Tags
Green List (high evidence)
DNAAF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 13, MIM# 613193
Tags
Green List (high evidence)
DNAAF2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 10, MIM# 612518
Tags
Green List (high evidence)
DNAAF3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 2, MIM# 606763
Tags
Green List (high evidence)
DNAAF4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 25, MIM# 615482
Tags
  • founder
  • SV/CNV
Green List (high evidence)
DNAAF5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 18, MIM# 614874
Tags
Green List (high evidence)
DNAH11
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 7, with or without situs inversus, MIM#611884
Tags
Green List (high evidence)
DNAH17
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Phenotypes
  • spermatogenic failure 39 (MONDO:0032845)
Tags
Green List (high evidence)
DNAH5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 3, with or without situs inversus (MIM #608644)
Tags
Green List (high evidence)
DNAH7
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Primary ciliary dyskinesia, MONDO:0016575, DNAH7-related
Tags
Green List (high evidence)
DNAH9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 40, MIM# 618300
Tags
Green List (high evidence)
DNAI1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 1, with or without situs inversus, MIM# 244400
Tags
Green List (high evidence)
DNAI2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 9, with or without situs inversus, MIM# 612444
Tags
Green List (high evidence)
DNAJB13
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ciliary dyskinesia, primary, 34 617091
Tags
Green List (high evidence)
DRC1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 21, MIM# 615294
Tags
  • SV/CNV
Green List (high evidence)
EFCAB1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ciliary dyskinesia, primary, 53, MIM# 620642
Tags
  • new gene name
Green List (high evidence)
FOXJ1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ciliary dyskinesia, primary, 43, MIM# 618699
  • hydrocephalus
  • chronic destructive airway disease
  • randomization of left/right body asymmetry
Tags
Green List (high evidence)
GAS8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 33, mIM# 616726
Tags
Green List (high evidence)
HYDIN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 5 (MIM#608647)
Tags
Green List (high evidence)
LRRC56
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Ciliary dyskinesia, primary, 39 618254
Tags
Green List (high evidence)
LRRC6
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 19, MIM# 614935
Tags
Green List (high evidence)
MCIDAS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 42 (MIM#618695)
Tags
Green List (high evidence)
NEK10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Ciliary dyskinesia, primary, 44, MIM# 618781
  • Bronchiectasis
Tags
Green List (high evidence)
OFD1
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Joubert syndrome 10, MIM 300804
  • Orofaciodigital syndrome I, MIM 311200
  • Simpson-Golabi-Behmel syndrome, type 2, MIM 300209
  • Primary ciliary dyskinesia
Tags
Green List (high evidence)
PIH1D3
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 36, X-linked (MIM#300991)
Tags
Green List (high evidence)
RPGR
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Retinitis pigmentosa, X-linked, and sinorespiratory infections, with or without deafness, MIM# 300455
Tags
Green List (high evidence)
RSPH1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 24 (MIM#615481)
Tags
Green List (high evidence)
RSPH3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 32 (MIM#616481)
Tags
Green List (high evidence)
RSPH4A
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 11 (MIM#612649)
Tags
Green List (high evidence)
RSPH9
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 12 (MIM#612650)
Tags
Green List (high evidence)
SCNN1G
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Bronchiectasis with or without elevated sweat chloride 3, MIM# 613071
Tags
Green List (high evidence)
SPAG1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 28 (MIM#615505)
Tags
Green List (high evidence)
TP73
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ciliary dyskinesia, primary, 47, and lissencephaly, MIM#619466
Tags
Green List (high evidence)
TTC12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ciliary dyskinesia
Tags
Green List (high evidence)
TTC25
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Ciliary dyskinesia, primary, 35 (MIM#617092)
Tags
  • new gene name
Green List (high evidence)
TUBB4B
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Primary ciliary dyskinesia, MONDO:0016575, TUBB4B-related
Tags
Green List (high evidence)
ZMYND10
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 22, MIM#615444
Tags
Amber List (moderate evidence)
CFAP57
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Van der Woude Syndrome
  • Primary ciliary dyskinesia
Tags
Amber List (moderate evidence)
CFAP74
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Primary ciliary dyskinesia
  • infertility
Tags
Amber List (moderate evidence)
DNAH1
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • ?Ciliary dyskinesia, primary, 37 617577
  • Spermatogenic failure 18 617576
Tags
Amber List (moderate evidence)
DNAH6
2 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Heterotaxy, Azoospermia
Tags
Amber List (moderate evidence)
DNAH8
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Spermatogenic failure 46, MIM#619095
  • Asthenozoospermia
  • primary ciliary dyskinesia
Tags
Amber List (moderate evidence)
DNAL1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 16, MIM# 614017
Tags
  • founder
Amber List (moderate evidence)
GAS2L2
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 41 (MIM # 618449)
Tags
Amber List (moderate evidence)
NFKB1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Immunodeficiency, common variable, 12 616576
Tags
Amber List (moderate evidence)
NFKB2
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Immunodeficiency, common variable, 10 615577
Tags
Amber List (moderate evidence)
NME5
3 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Primary ciliary dyskinesia
Tags
Amber List (moderate evidence)
PIK3CD
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Immunodeficiency 14 615513
Tags
Amber List (moderate evidence)
PIK3R1
2 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • ?Agammaglobulinemia 7, autosomal recessive 615214
  • Immunodeficiency 36 616005
  • SHORT syndrome 269880
Tags
Amber List (moderate evidence)
SCNN1A
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Amber
Phenotypes
  • Bronchiectasis with or without elevated sweat chloride 2 (MIM#613021)
  • MONDO:0013087
Tags
Amber List (moderate evidence)
SCNN1B
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review
  • Expert Review Amber
Phenotypes
  • Bronchiectasis with or without elevated sweat chloride 1 (MIM#211400)
Tags
Amber List (moderate evidence)
SPEF2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Spermatogenic failure 43, MIM#618751
  • Primary ciliary dyskinesia-like phenotype
Tags
Red List (low evidence)
AKNA
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Primary ciliary dyskinesia, MONDO:0016575, AKNA-related
Tags
Red List (low evidence)
BRWD1
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Ciliary dyskinesia, primary, 51, MIM# 620438
Tags
  • disputed
Red List (low evidence)
CFAP221
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Primary ciliary dyskinesia
Tags
Red List (low evidence)
CFAP54
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hydrocephalus, male infertility, mucus accumulation
Tags
Red List (low evidence)
GOLGA3
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Primary ciliary dyskinesia
Tags
Red List (low evidence)
ITCH
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Autoimmune disease, multisystem, with facial dysmorphism 613385
  • primary ciliary dyskinesia
Tags
Red List (low evidence)
NME8
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Ciliary dyskinesia, primary, 6, MIM# 610852
Tags
Red List (low evidence)
STK36
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
Phenotypes
  • Ciliary dyskinesia, primary, 46, MIM# 619436
Tags

Major version comments

  • 2020-10-18 22:00 Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics) promoted panel to 1.0
    Fully reviewed and promoted to V1.

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  • Whole panel
  • Green list (high evidence)
  • Green and Amber Genes
  • Amber Genes
  • Red list (low evidence)

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