Congenital Heart Defect
Gene: PKD1L1EnsemblGeneIds (GRCh38): ENSG00000158683
EnsemblGeneIds (GRCh37): ENSG00000158683
OMIM: 609721, Gene2Phenotype
PKD1L1 is in 5 panels
1 review
Joce vd Bergen (Other)
Numerous families (6 families, 9 affected individuals) reported with heterotaxy and complex congenital heart defects, with biallelic variants (primarily nonsense, frameshift, splice site and a missense variant) in the PKD1L1 gene. Three reports with additional features (3079108, 30791085, 30791085), such as congenital asplenia, sideroblastic anemia, hydrops fetalis.
Several animal models suggest PKD1L1 plays a significant role in the development of L-R asymmetry and establish the L-R axis in vertebrate organisms, including mouse null and missense substitution models and a medaka knockout. Where complex congenital heart defects are often associated with laterality defects (ranging from situs inversus totalis (SIT) to situs
ClinVar: reports all published variants presented, plus 1 additional nonsense variant (not published). Summary: likely pathogenic/pathogenic (6 nonsense loss of function, 2 splice site and 1 missense variant), associated with autosomal visceral heterotaxy type 8, MIM 617205).
Sources: LiteratureCreated: 21 Nov 2023, 12:12 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Heterotaxy, visceral, 8, autosomal; HTX8 (MIM617205)
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Phenotypes
-
- Heterotaxy, visceral, 8, autosomal
- HTX8 (MIM617205)
- OMIM
- 609721
- Clinvar variants
- Variants in PKD1L1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: pkd1l1 has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: pkd1l1 has been classified as Green List (High Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Joce vd Bergen (Other)gene: PKD1L1 was added gene: PKD1L1 was added to Congenital Heart Defect. Sources: Literature Mode of inheritance for gene: PKD1L1 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: PKD1L1 were set to PMID: 27616478; 31026592; 3079108; 30791085; 33655537 Phenotypes for gene: PKD1L1 were set to Heterotaxy, visceral, 8, autosomal; HTX8 (MIM617205) Review for gene: PKD1L1 was set to GREEN