Congenital Heart Defect
Gene: GATA4EnsemblGeneIds (GRCh38): ENSG00000136574
EnsemblGeneIds (GRCh37): ENSG00000136574
OMIM: 600576, Gene2Phenotype
GATA4 is in 9 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Atrial septal defect 2 MIM#607941; Atrioventricular septal defect 4 MIM#614430; Ventricular septal defect 1 MIM#614429
Sharyn Stockmyer (Other)
GATA4 is a zinc finger transcription factor involved in gene expression and is important for heart development. It has a "definitive" classification on ClinGen.
• Garg et al identified a G296S missense mutation of GATA4 in all affected family members in a large pedigree, and no unaffected members or controls. PMID 12845333
• Yang et al found 3 novel heterozygous variants in 52 probands of Tetraology of fallot. The variants all segregated with disease with complete penetrance. Functional analysis showed that the GATA4 mutants were consistently associated with diminished DNA-binding affinity and decreased transcriptional activity PMID 24000169.
Sixteen unique variants (missense, nonsense, frameshift) that have been reported in sixteen probands in seven publications (PMIDs: 15810002, 12845333, 22101736, 18672102, 24000169, 29377543, 28991257) are included in the ClinGen curation.Created: 26 Nov 2023, 2:59 a.m. | Last Modified: 26 Nov 2023, 2:59 a.m.
Panel Version: 0.406
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Congenital heart disease - multiple types
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Victorian Clinical Genetics Services
- Phenotypes
-
- Atrial septal defect 2 MIM#607941
- Atrioventricular septal defect 4 MIM#614430
- Ventricular septal defect 1 MIM#614429
- OMIM
- 600576
- Clinvar variants
- Variants in GATA4
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: gata4 has been classified as Green List (High Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: GATA4 were changed from to Atrial septal defect 2 MIM#607941; Atrioventricular septal defect 4 MIM#614430; Ventricular septal defect 1 MIM#614429
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: GATA4 were set to
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: GATA4 was changed from Unknown to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: GATA4 was added gene: GATA4 was added to Congenital Heart Defect_VCGS. Sources: Expert Review Green,Victorian Clinical Genetics Services Mode of inheritance for gene: GATA4 was set to Unknown