Cerebellar and Pontocerebellar Hypoplasia
Gene: FOXP1EnsemblGeneIds (GRCh38): ENSG00000114861
EnsemblGeneIds (GRCh37): ENSG00000114861
OMIM: 605515, Gene2Phenotype
FOXP1 is in 11 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Comment when marking as ready: Agree, appears a rare manifestation of this syndrome.Created: 29 Apr 2020, 4:21 a.m. | Last Modified: 29 Apr 2020, 4:21 a.m.
Panel Version: 0.114
Elena Savva (Victorian Clinical Genetics Services)
Haploinsufficiency has been reported for both missense and PTV, usually described as caused by haploinsufficiency. However dominant negative effects have also been suggested (OMIM)
Cerebellar/pons/vermis hypoplasia/atrophy not reported anywhere in OMIM. Multiple Decipher entries from DDD study, review of some - none mention cerebellar hypoplasia
PMID: 29090079 - 7 patients (aged 5-17yo) had MRIs, 6/7 report brain imaging abnormalities incl. "small partial cavum septum pellucidum (n = 1), mild diffuse periventricular leukomalacia (n = 1), and arachnoid cysts in the left hemisphere and cerebellum. Enlarged ventricles were the most common imaging finding". No mention of cerebellar hypoplasia.
PMID: 28735298 - "Half of the patients show structural brain abnormalities (11/23), including cerebral and/or cerebellar atrophy, cortical, subcortical and deep white matter abnormalities, and/or cerebellar abnormalities".
Even in supplementary tables, NO specific numbers for each abnormality was provided.
Summary: AMBER - though not opposed to RED given how well studies this gene is. Few papers bother with MRIs (not needed) due to the distinct dysmorphic features patients have.Created: 29 Apr 2020, 12:28 a.m. | Last Modified: 29 Apr 2020, 12:28 a.m.
Panel Version: 0.113
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Mental retardation with language impairment and with or without autistic features 613670
Publications
Mode of pathogenicity
Other
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Red
- Victorian Clinical Genetics Services
- Phenotypes
-
- Mental retardation with language impairment and with or without autistic features, MIM# 613670
- OMIM
- 605515
- Clinvar variants
- Variants in FOXP1
- Penetrance
- None
- Publications
- Panels with this gene
-
- Fetal anomalies
- Congenital Heart Defect
- Incidentalome_PREGEN_DRAFT
- Mendeliome
- Congenital diaphragmatic hernia
- Interstitial Lung Disease
- Intellectual disability syndromic and non-syndromic
- Genetic Epilepsy
- Congenital anomalies of the kidney and urinary tract (CAKUT) Syndromic
- Autism
- Cerebellar and Pontocerebellar Hypoplasia
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: foxp1 has been classified as Red List (Low Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: foxp1 has been classified as Red List (Low Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: FOXP1 were changed from to Mental retardation with language impairment and with or without autistic features, MIM# 613670
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: FOXP1 were set to
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: FOXP1 was changed from Unknown to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: FOXP1 was added gene: FOXP1 was added to Cerebellar and Pontocerebellar hypoplasia_VCGS. Sources: Expert Review Green,Victorian Clinical Genetics Services Mode of inheritance for gene: FOXP1 was set to Unknown