Brain Calcification
Gene: SLC20A2EnsemblGeneIds (GRCh38): ENSG00000168575
EnsemblGeneIds (GRCh37): ENSG00000168575
OMIM: 158378, Gene2Phenotype
SLC20A2 is in 7 panels
3 reviews
Yetong Chen (University of Melbourne)
Additional cases are reported.
PMID 35850697 reports 6 patients from the same family with primary familial brain calcification. A reported SLC20A2 variant (c.1723G > T, p.(Glu575*)) was identified in the family. Co-segregation of brain calcification and the SLC20A2 variant was observed.
PMID 34025715 reports 7 patients with brain calcifications. 5 of them were from the same family harbouring the SLC20A2 variable (c.806delC), revealing brain calcifications in multiple regions. Co-segregation of SLC20A2 and brain calcification was observed in this family. The rest are 2 unrelated patients with different SLC20A2 variants (c.1154delG and c.1154delG) who developed bilateral symmetric calcification.Created: 27 Apr 2023, 7:52 a.m. | Last Modified: 27 Apr 2023, 7:52 a.m.
Panel Version: 1.51
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Basal ganglia calcification, idiopathic, 1, MIM# 213600
Publications
Teresa Zhao (Victorian Clinical Genetics Services)
PMID: 34267336 reported a 55 yo female born from healthy consanguineous parents.
- At 20 yo, she was diagnosed with basal ganglia clacification. No endocrine or metabolic disorders related to brain calcifications were found.
- At 28, she developed a psychotic disorder including delirium consistent with paranoia or delusional disorder that improved with aripiprazole.
- At 40s, she started with motor clumsiness, balance disturbance, and severe dysarthria. In recent years, asymmetric Parkinsonism was observed.
- Homozygous missense p.Arg71Cys was identified in the proband.Created: 1 Nov 2021, 4:42 a.m. | Last Modified: 1 Nov 2021, 4:42 a.m.
Panel Version: 1.12
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Basal ganglia calcification MIM#213600
Publications
- PMID: 34267336
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Over 50 families reported. Affected individuals can either be asymptomatic or show a wide spectrum of neuropsychiatric symptoms, including parkinsonism, dystonia, tremor, ataxia, dementia, psychosis, seizures, and chronic headache.Created: 10 Sep 2020, 4:24 a.m. | Last Modified: 10 Sep 2020, 4:24 a.m.
Panel Version: 0.34
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Basal ganglia calcification, idiopathic, 1, MIM# 213600
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Victorian Clinical Genetics Services
- Phenotypes
-
- Basal ganglia calcification, idiopathic, 1, MIM# 213600
- OMIM
- 158378
- Clinvar variants
- Variants in SLC20A2
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: slc20a2 has been classified as Green List (High Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: SLC20A2 were changed from to Basal ganglia calcification, idiopathic, 1, MIM# 213600
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: SLC20A2 were set to
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: SLC20A2 was changed from Unknown to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: SLC20A2 was added gene: SLC20A2 was added to Brain calcification_VCGS. Sources: Expert Review Green,Victorian Clinical Genetics Services Mode of inheritance for gene: SLC20A2 was set to Unknown