Imprinting disorders
Gene: TLE6EnsemblGeneIds (GRCh38): ENSG00000104953
EnsemblGeneIds (GRCh37): ENSG00000104953
OMIM: 612399, Gene2Phenotype
TLE6 is in 2 panels
1 review
Anna Le Fevre (Victorian Clinical Genetics Services)
The first report of a single homozygous missense variant in three women from two families with primary infertility was published in 2015. In 2021, Zheng et al reported six biallelic variants in TLE6 in five patients with embryonic arrest, accompanied by direct cleavage and severe fragmentation at the cleavage stage. A mechanism is proposed.
I am uncertain regarding classification of this gene (amber vs green) due to the low specificity of this phenotype. I am uncertain if the changes seen in the early embryo, such as fragmentation, make this phenotype more specific.
As is the case for other genes encoding components of the subcortical maternal complex (SCMC), the pathogenicity of variants can be difficult to establish as reproductive outcomes are not recorded in genomic databases and variants may be listed in population databases as they are not classed as pathogenic in males or women with no reproductive history.
Functional studies of genes encoding components of the SCMC are limited as their expression is restricted to the oocyte and early embryo.
Sources: LiteratureCreated: 15 Oct 2021, 1:55 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Pre-implantation embryonic lethality MIM#616814
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Phenotypes
-
- Pre-implantation embryonic lethality MIM#616814
- OMIM
- 612399
- Clinvar variants
- Variants in TLE6
- Penetrance
- unknown
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: tle6 has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: tle6 has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance
Anna Le Fevre (Victorian Clinical Genetics Services)gene: TLE6 was added gene: TLE6 was added to Imprinting disorders. Sources: Literature Mode of inheritance for gene: TLE6 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: TLE6 were set to 26537248; 25542835 Phenotypes for gene: TLE6 were set to Pre-implantation embryonic lethality MIM#616814 Penetrance for gene: TLE6 were set to unknown Review for gene: TLE6 was set to AMBER