Vitreoretinopathy
Gene: COL9A3EnsemblGeneIds (GRCh38): ENSG00000092758
EnsemblGeneIds (GRCh37): ENSG00000092758
OMIM: 120270, Gene2Phenotype
COL9A3 is in 13 panels
2 reviews
Ain Roesley (Victorian Clinical Genetics Services)
In family 2 with missense Gly130Ser, there is 228 hets 0 homs in gnomAD v2.
This leaves 1 family with the splice variant which is absent in gnomAD, cDNA studies to prove a splice defect and segregation in 11 affecteds (genotyped) across 2 generationsCreated: 2 Mar 2022, 6:45 a.m. | Last Modified: 3 Mar 2022, 10:29 p.m.
Panel Version: 1.2
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Peripheral vitreoretinal degeneration and retinal detachment, AD
Publications
Variants in this GENE are reported as part of current diagnostic practice
Kristin Rigbye (Victorian Clinical Genetics Services)
New genotype-phenotype correlation reported in PMID: 33633367 - Heterozygous COL9A3 variants cause severe peripheral vitreoretinal degeneration and retinal detachment:
c.1107+1G>C and Gly130Ser
cDNA studies of the splice variant demonstrated an in-frame deletion in the COL2 domain, and the missense variant occurred in the COL3 domain.
In Family 1, 14 affected individuals of Filipino/Australian ethnicity presented with vitreoretinal degeneration in a pattern suggestive of autosomal dominant inheritance (Fig. 1A). Affected individuals had extensive bilateral lattice vitreoretinal degeneration, with an abnormal vitreoretinal interface particularly at the vitreous base, where the retina was thinned and prone to tears. In Family 2 from New Zealand, three affected members of European background presented with vitreoretinal degeneration and retinal detachment, also in a pattern suggestive of autosomal dominant inheritance (Fig. 1B). In affected individuals in both families with extensive vitreoretinal degeneration, laser intervention or cryotherapy was recommended to prevent further vitreoretinal detachment or tearing.
Sources: LiteratureCreated: 7 Jun 2021, 6:37 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Peripheral vitreoretinal degeneration and retinal detachment, AD
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Amber
- Phenotypes
-
- Peripheral vitreoretinal degeneration and retinal detachment, AD
- OMIM
- 120270
- Clinvar variants
- Variants in COL9A3
- Penetrance
- None
- Publications
- Panels with this gene
-
- BabyScreen+ newborn screening
- Vitreoretinopathy
- Stickler Syndrome
- Muscular dystrophy and myopathy_Paediatric
- Pierre Robin Sequence
- Deafness_IsolatedAndComplex
- Deafness_Isolated
- Skeletal dysplasia
- Multiple epiphyseal dysplasia and pseudoachondroplasia
- Fetal anomalies
- Clefting disorders
- Additional findings_Paediatric
- Mendeliome
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: col9a3 has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Sue White (Victorian Clinical Genetics Services)Gene: col9a3 has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Sue White (Victorian Clinical Genetics Services)Gene: col9a3 has been removed from the panel.
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Kristin Rigbye (Victorian Clinical Genetics Services)gene: COL9A3 was added gene: COL9A3 was added to Vitreoretinopathy. Sources: Literature Mode of inheritance for gene: COL9A3 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: COL9A3 were set to 33633367 Phenotypes for gene: COL9A3 were set to Peripheral vitreoretinal degeneration and retinal detachment, AD Review for gene: COL9A3 was set to GREEN