Dystonia - isolated/combined
Gene: COL6A3EnsemblGeneIds (GRCh38): ENSG00000163359
EnsemblGeneIds (GRCh37): ENSG00000163359
OMIM: 120250, Gene2Phenotype
COL6A3 is in 13 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
PMID: 32037012 - Panda and Sharawat 2020 - report a new case of COL6A3 mutation associated early-onset isolated dystonia-DYT27 in an 8 year old boy. Compound heterozygous variants in exons 10 and 12 found (p.Gly1517Ser and p.Pro1894Leu).Created: 5 Sep 2020, 4:45 a.m. | Last Modified: 5 Sep 2020, 4:45 a.m.
Panel Version: 0.15
Three unrelated German families reported initially. Onset of segmental isolated dystonia involving the face, neck, bulbar muscles, and upper limbs at age 20 years. All patients carried mutations affecting the C terminus, with at least 1 mutation specifically affecting exon 41. Note recent report of bi-allelic variants in exon 10 and 12 however (PMID: 32037012) and also PMID: 26872670 which calls into question this gene-disease association, due in part to presence of two homozygotes for the p.Pro3082Arg variant in gnomad.Created: 28 Mar 2020, 9:51 p.m. | Last Modified: 28 Mar 2020, 9:51 p.m.
Panel Version: 0.27
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Dystonia 27, MIM#616411
Publications
Michelle Torres (Victorian Clinical Genetics Services)
Genotype-phenotype correlation:
1. Bethlem myopathy: AR is more severe and caused by LoF; AD is milder and caused by inframe exon skipping variants and glycine substitutions. (PMID: 20301676);
2. Ullrich: AR is caused by NMD, ss leading to inframe del or normal inframe del. AD is milder and caused by glycine substitutions. AD is also caused by inframe exon del (caused by ss) and normal inframe del that preserve a unique cysteine important for dimer formation. (PMID: 20301676)
*Bethlem and Ullrich are overlapping
3. Dystonia: 3 German families studied, all dystonia patients had at least one variant in exon 41 (C-terminal), while myopathies cluster in the N-terminal. Only biallelic patients reported (PMID: 26004199)Created: 27 Mar 2020, 6:30 a.m. | Last Modified: 27 Mar 2020, 6:30 a.m.
Panel Version: 0.20
Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Phenotypes
Bethlem myopathy 1, 158810 AD, AR; Dystonia 27, 616411 AR; Ullrich congenital muscular dystrophy 1, 254090 AD, AR
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Royal Melbourne Hospital
- Victorian Clinical Genetics Services
- Phenotypes
-
- Dystonia 27, MIM#616411
- OMIM
- 120250
- Clinvar variants
- Variants in COL6A3
- Penetrance
- None
- Publications
- Panels with this gene
-
- Cerebral Palsy
- Muscular dystrophy and myopathy_Paediatric
- Mackenzie's Mission_Reproductive Carrier Screening
- Limb-Girdle Muscular Dystrophy and Distal Myopathy
- Fetal anomalies
- Additional findings_Paediatric
- Prepair 1000+
- Arthrogryposis
- Mendeliome
- Eye Anterior Segment Abnormalities
- Dystonia - isolated/combined
- BabyScreen+ newborn screening
- Aortopathy_Connective Tissue Disorders
History Filter Activity
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: COL6A3 were changed from Dystonia 27 to Dystonia 27, MIM#616411
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: COL6A3 were set to
Entity classified by Genomics England curator
Bryony Thompson (Royal Melbourne Hospital)Gene: col6a3 has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Bryony Thompson (Royal Melbourne Hospital)Gene: col6a3 has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Bryony Thompson (Royal Melbourne Hospital)gene: COL6A3 was added gene: COL6A3 was added to Dystonia - isolated/combined_RMH. Sources: Royal Melbourne Hospital,Expert Review Green Mode of inheritance for gene: COL6A3 was set to BIALLELIC, autosomal or pseudoautosomal Phenotypes for gene: COL6A3 were set to Dystonia 27