Ataxia - paediatric
Gene: KCNA2EnsemblGeneIds (GRCh38): ENSG00000177301
EnsemblGeneIds (GRCh37): ENSG00000177301
OMIM: 176262, Gene2Phenotype
KCNA2 is in 7 panels
2 reviews
Elena Savva (Victorian Clinical Genetics Services)
Missense variants cluster within the ion transporter domain (Decipher)
The proline(405)–valine(406)–proline(407) (PVP) motif in transmembrane domain S6 is a mutational hotspot (Doring, 2021)
LOF mechanism is commonly used in papers, but are often referring to DN
Missense variants demonstrate all of LOF, GOF and DN mechanisms.
Variability btw carriers of the same variant is reported, and intrafamilial variability is reported (Döring (2021))Created: 21 May 2021, 4:21 a.m. | Last Modified: 21 May 2021, 4:21 a.m.
Panel Version: 0.7652
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Developmental and epileptic encephalopathy 32, MIM#616366
Publications
Mode of pathogenicity
Other
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Review of 23 affected individuals in PMID 29050392: some variants are LoF and others GoF, and some genotype-phenotype correlations made. The main differences were (i) predominant focal (loss-of-function) versus generalized (gain-of-function) seizures and corresponding epileptic discharges with prominent sleep activation in most cases with loss-of-function mutations; (ii) more severe epilepsy, developmental problems and ataxia, and atrophy of the cerebellum or even the whole brain in about half of the patients with gain-of-function mutations; and (iii) most severe early-onset phenotypes, occasionally with neonatal onset epilepsy and developmental impairment, as well as generalised and focal seizures and EEG abnormalities for patients with gain- and loss-of-function mutations.Created: 12 Sep 2020, 4:24 a.m. | Last Modified: 12 Sep 2020, 4:24 a.m.
Panel Version: 0.240
Ataxia is part of the phenotype.
Sources: Expert listCreated: 27 Dec 2019, 5:17 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Early infantile encephalopathy 32, MIM#616366
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Expert list
- Royal Melbourne Hospital
- Phenotypes
-
- Early infantile encephalopathy 32, 616366
- OMIM
- 176262
- Clinvar variants
- Variants in KCNA2
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: kcna2 has been classified as Green List (High Evidence).
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: KCNA2 were set to
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Bryony Thompson (Royal Melbourne Hospital)gene: KCNA2 was added gene: KCNA2 was added to Ataxia - paediatric_RMH. Sources: Expert Review Green,Royal Melbourne Hospital Mode of inheritance for gene: KCNA2 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Phenotypes for gene: KCNA2 were set to Early infantile encephalopathy 32, 616366