Ataxia - adult onset
Gene: PNPT1EnsemblGeneIds (GRCh38): ENSG00000138035
EnsemblGeneIds (GRCh37): ENSG00000138035
OMIM: 610316, Gene2Phenotype
PNPT1 is in 7 panels
4 reviews
Chris Ciotta (Victorian Clinical Genetics Services)
An additional family with a heterozygous NMD-predicted variant (c.1287del Pro430Leufs*14) was identified in PMID: 37935417. A child, age of onset 3yo, with frequent falls, cerebellar signs, psychomotor delay, cerebellar atrophy and axonal sensory neuropathy was identified heterozygous for this variant. This variant was also identified in the heterozygous mother (32yo) and grandmother (63yo) who were both unaffected with normal MRIs.Created: 16 Jul 2024, 1:08 a.m. | Last Modified: 16 Jul 2024, 1:08 a.m.
Panel Version: 1.15
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Spinocerebellar ataxia 25 (MIM#608703)
Publications
- PMID: 37935417
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Three families reported with heterozygous variants and SCA25. Incomplete penetrance in one of the families. In the third family, the variant was inherited from an asymptomatic 80+ year old.
Note bi-allelic variants in this gene cause a mitochondrial disorder. Exact mechanism through which mono-allelic variants cause SCA25 not elucidated: authors speculate abnormal accumulation of mitochondrial RNA with subsequent leakage into the cytosol that may trigger a type 1 interferon response leading to neuroinflammation with neuronal dysfunction or neuronal loss.
Sources: LiteratureCreated: 13 Jul 2022, 11:55 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Spinocerebellar ataxia 25, MIM# 608703
Publications
Arina Puzriakova (Genomics England)
6 additional unrelated cases identified by Pennisi et al., 2022 (PMID: 33199448) with biallelic variants in this gene.Created: 1 Apr 2022, 10:25 a.m. | Last Modified: 1 Apr 2022, 10:25 a.m.
Panel Version: 0.12453
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Combined oxidative phosphorylation deficiency 13, OMIM:614932
Publications
Crystle Lee (Victorian Clinical Genetics Services)
Biallelic variants reported in patients with a wide clinical heterogeneity ranging from non-syndromic hearing loss to multisystemic Leigh syndrome.
Possible genotype-phenotype correlation: Combination of missense and a null allele resulting in less residual activity present with white matter abnormalities. Patients with only missense variants did not have white matter abnormalities (PMID: 28594066)Created: 20 Feb 2020, 9:56 p.m. | Last Modified: 20 Feb 2020, 9:56 p.m.
Panel Version: 0.1415
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Combined oxidative phosphorylation deficiency 13 (MIM#614932); Deafness, autosomal recessive 70 (MIM#614934)
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Amber
- Literature
- Phenotypes
-
- Spinocerebellar ataxia 25, MIM# 608703
- OMIM
- 610316
- Clinvar variants
- Variants in PNPT1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: PNPT1 were set to 35411967
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: pnpt1 has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: pnpt1 has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: PNPT1 was added gene: PNPT1 was added to Ataxia - adult onset. Sources: Literature Mode of inheritance for gene: PNPT1 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: PNPT1 were set to 35411967 Phenotypes for gene: PNPT1 were set to Spinocerebellar ataxia 25, MIM# 608703 Review for gene: PNPT1 was set to AMBER