Skeletal dysplasia
Gene: NEPROEnsemblGeneIds (GRCh38): ENSG00000163608
EnsemblGeneIds (GRCh37): ENSG00000163608
OMIM: 617089, Gene2Phenotype
NEPRO is in 2 panels
3 reviews
Achchuthan Shanmugasundram (Genomics England)
PMID:37294112 reported a 7-year-old girl from an Arabic-speaking community in Eastern Africa with Anauxetic dysplasia 3 and another homozygous NEPRO variant (p.Arg94Cys). She was born to consanguineous parents, who reported that their shared ancestor was of Arab descent. This patient presented with clinically relevant features not previously described in ANXD3: atlantoaxial subluxation, extensive dental anomalies, and a sagittal suture craniosynostosis resulting in scaphocephaly.
In total, four unrelated families were reported with three different homozygous variants. Hence, this gene can be promoted to green rating.Created: 17 Jan 2024, 10:57 a.m. | Last Modified: 17 Jan 2024, 10:57 a.m.
Panel Version: 0.260
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Anauxetic dysplasia 3, OMIM:618853
Publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
PMIDs 26633546, 29620724: 2 families with the same homozygous missense variant, haplotype analysis confirmed the founder nature of the variant. PMID 31250547: 1 family with homozygous novel missense All 5 affected individuals have severe short stature, brachydactyly, skin laxity, joint hypermobility, and joint dislocations. They also have short metacarpals, broad middle phalanges, and metaphyseal irregularities. No functional studies.
Sources: LiteratureCreated: 7 May 2021, 1:51 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Anauxetic dysplasia 3, MIM618853
Publications
Chern Lim (Victorian Clinical Genetics Services)
PMIDs 26633546, 29620724: 2 families with the same homozygous missense variant, haplotype analysis confirmed the founder nature of the variant.
PMID 31250547: 1 family with homozygous novel missense
All 5 affected individuals have severe short stature, brachydactyly, skin laxity, joint hypermobility, and joint dislocations. They also have short metacarpals, broad middle phalanges, and metaphyseal irregularities. No functional studies.
Sources: LiteratureCreated: 4 May 2021, 4:39 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Anauxetic dysplasia 3, MIM618853
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Literature
- Phenotypes
-
- Anauxetic dysplasia 3, MIM618853
- OMIM
- 617089
- Clinvar variants
- Variants in NEPRO
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: nepro has been classified as Green List (High Evidence).
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: NEPRO were set to 26633546; 29620724; 31250547
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: nepro has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: nepro has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: NEPRO was added gene: NEPRO was added to Skeletal dysplasia. Sources: Literature Mode of inheritance for gene: NEPRO was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: NEPRO were set to 26633546; 29620724; 31250547 Phenotypes for gene: NEPRO were set to Anauxetic dysplasia 3, MIM618853 Review for gene: NEPRO was set to AMBER