Skeletal dysplasia
Gene: NEK1EnsemblGeneIds (GRCh38): ENSG00000137601
EnsemblGeneIds (GRCh37): ENSG00000137601
OMIM: 604588, Gene2Phenotype
NEK1 is in 15 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Bi-allelic variants in this gene are associated with a skeletal ciliopathy.Created: 5 May 2021, 12:16 a.m. | Last Modified: 5 May 2021, 12:16 a.m.
Panel Version: 0.7488
Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Phenotypes
Short-rib thoracic dysplasia 6 with or without polydactyly, MIM# 263520; Amyotrophic lateral sclerosis, susceptibility to, 24, MIM# 617892
Publications
Eleanor Williams (Genomics England)
PMID: 33445179 - Lattante et al 2021 - identify 20 NEK1 rare variants in 22 unrelated patients from an Italian cohort of 531 sporadic and familial amyotrophic lateral sclerosis (ALS) patients. 2 novel frameshift variants, 18 missense variants, and a novel variant in the start codon were identified. They found a decrease in NEK1 protein levels in fibroblasts from 4 patients (one with a frameshift variant, the other 3 with missense variants), which suggests that missense variants have a pathogenic role. In 7 NEK1 patients they identified additional variants in ALS-associated genes (C9orf72, CCNF, ATXN1, SOD1, FIG4) which supports an oligogenic ALS model.Created: 4 May 2021, 10:03 a.m. | Last Modified: 4 May 2021, 10:03 a.m.
Panel Version: 0.7488
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
{Amyotrophic lateral sclerosis, susceptibility to, 24}, OMIM:617892
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Radboud University Medical Center, Nijmegen
- Illumina TruGenome Clinical Sequencing Services
- NHS GMS
- Emory Genetics Laboratory
- Victorian Clinical Genetics Services
- Phenotypes
-
- Short rib thoracic dysplasia 6 with or without polydactyly - 263520
- Short rib-polydactyly syndrome, type IIA, 263520
- Short Rib Polydactyly Syndrome
- SRPS type 2 (Majewski)
- OMIM
- 604588
- Clinvar variants
- Variants in NEK1
- Penetrance
- None
- Panels with this gene
-
- Ciliopathies
- Mackenzie's Mission_Reproductive Carrier Screening
- Polydactyly
- Clefting disorders
- Prepair 1000+
- BabyScreen+ newborn screening
- Renal Ciliopathies and Nephronophthisis
- Hydrops fetalis
- Motor Neurone Disease
- Skeletal dysplasia
- Fetal anomalies
- Additional findings_Paediatric
- Skeletal Dysplasia_Fetal
- Mendeliome
- Short Rib Polydactyly_Jeune Asphyxiating Thoracic Dystrophy_Skeletal Ciliopathy
History Filter Activity
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: NEK1 was added gene: NEK1 was added to Skeletal dysplasia. Sources: Emory Genetics Laboratory,NHS GMS,Illumina TruGenome Clinical Sequencing Services,Radboud University Medical Center, Nijmegen Mode of inheritance for gene: NEK1 was set to BIALLELIC, autosomal or pseudoautosomal Phenotypes for gene: NEK1 were set to Short rib thoracic dysplasia 6 with or without polydactyly - 263520; Short rib-polydactyly syndrome, type IIA, 263520; Short Rib Polydactyly Syndrome; SRPS type 2 (Majewski)