Skeletal dysplasia
Gene: IFITM5EnsemblGeneIds (GRCh38): ENSG00000206013
EnsemblGeneIds (GRCh37): ENSG00000206013
OMIM: 614757, Gene2Phenotype
IFITM5 is in 7 panels
2 reviews
Seb Lunke (Victorian Clinical Genetics Services)
Comment on mode of pathogenicity: LoF not established, alternative neomorph/GoF postulated but not yet conclusively provenCreated: 15 Nov 2021, 5:49 a.m. | Last Modified: 15 Nov 2021, 5:49 a.m.
Panel Version: 0.136
Ain Roesley (Victorian Clinical Genetics Services)
- A recurrent c.-14C>T variant has been reported in many patients with type V OI. It introduces an alternative in-frame start codon upstream that is stronger than the reference start codon in transfected HEK cells (PMIDs: 22863190, 22863195). However, the effect of mutant protein (5 amino acids longer) remains unknown but neomorphic mechanism is a widely accepted hypothesis (PMIDs: 25251575, 32383316).
- Missense p.(S40L) variant has a different disease mechanism to that of the recurrent 5'UTR variant: SERPINF1 gene expression and PEDF secretion was increased by the 5'UTR variant but decreased by the p.(S40L) substitution (PMID: 24519609).Created: 15 Nov 2021, 1:21 a.m. | Last Modified: 15 Nov 2021, 1:21 a.m.
Panel Version: 0.135
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Osteogenesis imperfecta, type V MIM#610967
Publications
Mode of pathogenicity
Other
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Eligibility statement prior genetic testing
- Radboud University Medical Center, Nijmegen
- NHS GMS
- Emory Genetics Laboratory
- Phenotypes
-
- Osteogenesis imperfecta, type V MIM#610967
- Tags
- OMIM
- 614757
- Clinvar variants
- Variants in IFITM5
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Other
- Panels with this gene
History Filter Activity
Set publications
Seb Lunke (Victorian Clinical Genetics Services)Publications for gene: IFITM5 were set to
Entity classified by Genomics England curator
Seb Lunke (Victorian Clinical Genetics Services)Gene: ifitm5 has been classified as Green List (High Evidence).
Set Phenotypes
Seb Lunke (Victorian Clinical Genetics Services)Phenotypes for gene: IFITM5 were changed from Osteogenesis imperfecta, type V 610967 to Osteogenesis imperfecta, type V MIM#610967
Added Tag
Seb Lunke (Victorian Clinical Genetics Services)Tag 5'UTR tag was added to gene: IFITM5.
Set mode of pathogenicity
Seb Lunke (Victorian Clinical Genetics Services)Mode of pathogenicity for gene: IFITM5 was changed from to Other
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: IFITM5 was added gene: IFITM5 was added to Skeletal dysplasia. Sources: Emory Genetics Laboratory,NHS GMS,Radboud University Medical Center, Nijmegen,Expert Review Green,Eligibility statement prior genetic testing Mode of inheritance for gene: IFITM5 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Phenotypes for gene: IFITM5 were set to Osteogenesis imperfecta, type V 610967