Motor Neurone Disease
Gene: ATL1EnsemblGeneIds (GRCh38): ENSG00000198513
EnsemblGeneIds (GRCh37): ENSG00000198513
OMIM: 606439, Gene2Phenotype
ATL1 is in 8 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Neuropathy: Autosomal dominant hereditary sensory neuropathy type 1D is characterized by adult onset of a distal axonal sensory neuropathy affecting all modalities, often associated with distal ulceration and amputation as well as hyporeflexia, although some patients may show features suggesting upper neuron involvement. Five unrelated families reported.
HSP: both mono-allelic and bi-allelic disease, with bi-allelic being earlier onset and more severe. Hom nonsense (PMID: 24473461) and hom missense (PMID: 26888483) were reported for AR HSP. Disease mechanism (PTC variants): LoF. Disease mechanism (missense variants): Dominant negative: Mutant atlastin-1 protein functionally impair the atlastin-1 oligomer by binding to WT protein β> reduce GTPase activity (PMID: 16537571) β> cause HSP3A.
Variants fall outside of the GTPase related motifs or the conserved motifs are linked to neuropathy, suggesting an alternative mechanism is used apart from dom-neg (PMID: 28396731) β> cause HSN1D
More than 90% of the mutations were located in exon 4, 7, 8 and 12 (PMID: 16401858)Created: 30 Apr 2021, 9:38 p.m. | Last Modified: 30 Apr 2021, 9:38 p.m.
Panel Version: 0.7447
Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Phenotypes
Neuropathy, hereditary sensory, type ID , MIM#613708; MONDO:0013381; Spastic paraplegia 3A, MIM 182600; Hereditary spastic paraplegia, AR
Publications
Bryony Thompson (Royal Melbourne Hospital)
The HSP caused by this gene can be classified as a non-ALS MND, affecting the upper motor neurons.
Sources: Expert listCreated: 19 Jun 2020, 3:41 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Spastic paraplegia 3A, autosomal dominant MIM#182600
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Expert Review Green
- Expert list
- Victorian Clinical Genetics Services
- Phenotypes
-
- Spastic paraplegia 3A, autosomal dominant MIM#182600
- OMIM
- 606439
- Clinvar variants
- Variants in ATL1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Bryony Thompson (Royal Melbourne Hospital)Gene: atl1 has been classified as Green List (High Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Bryony Thompson (Royal Melbourne Hospital)gene: ATL1 was added gene: ATL1 was added to Motor Neuron Disease. Sources: Expert list Mode of inheritance for gene: ATL1 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: ATL1 were set to 16765570 Phenotypes for gene: ATL1 were set to Spastic paraplegia 3A, autosomal dominant MIM#182600 Review for gene: ATL1 was set to GREEN