1. Panels
  2. Immunological disorders_SuperPanel

Immunological disorders_SuperPanel (Version 13.3)

Level 2: Immunological disorders

Relevant disorders: Abnormality of the immune system, HP:0002715
This panel contains these 16 panels:
Autoinflammatory Disorders v2.3
Combined Immunodeficiency v1.114
Bone Marrow Failure v1.112
Phagocyte Defects v1.33
Defects of intrinsic and innate immunity v1.19
Common Variable Immunodeficiency v1.12
Severe Combined Immunodeficiency (absent T present B cells) v1.9
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
Susceptibility to Fungal Infections v1.7
Hereditary angioedema v1.5
Disorders of immune dysregulation v1.5
Autoimmune Lymphoproliferative Syndrome v1.0
Predominantly Antibody Deficiency v1.0
Susceptibility to Viral Infections v0.131
Inflammatory bowel disease v0.122
Complement Deficiencies v0.74
Panel types: Superpanel, Victorian Clinical Genetics Services, Royal Melbourne Hospital
Description
This is a superpanel of all the International Union of Immunological Societies inborn errors of immunology.

972 Entities

934 reviewed, 718 green

List Entity Reviews Mode of inheritance Details
972 Entitiess
Green List (high evidence)
ABCB7
Bone Marrow Failure v1.112
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Anemia, sideroblastic, with ataxia, MIM# 301310
Tags
Green List (high evidence)
ACD
Bone Marrow Failure v1.112
3 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • telomere syndrome MONDO:0100137
  • dyskeratosis congenita, autosomal dominant 6 MONDO:0014690
  • Hoyeraal-Hreidarsson syndrome MONDO:0018045
Tags
Green List (high evidence)
ACP5
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Expert list
Phenotypes
  • Spondyloenchondrodysplasia with immune dysregulation, MIM# 607944
  • Short stature
  • SLE, thrombocytopenia and autoimmune haemolytic anaemia
  • Possibly recurrent bacterial and viral infections
Tags
Green List (high evidence)
ACP5
Disorders of immune dysregulation v1.5
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
ACTB
Bone Marrow Failure v1.112
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Thrombocytopenia 8, with dysmorphic features and developmental delay, MIM# 620475
Tags
Green List (high evidence)
ADA
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency due to ADA deficiency, MIM# 102700
  • MONDO:0007064
Tags
Green List (high evidence)
ADA
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency due to ADA deficiency, MIM# 102700
  • MONDO:0007064
Tags
Green List (high evidence)
ADA
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
ADA2
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Vasculitis, autoinflammation, immunodeficiency, and haematologic defects syndrome, MIM# 615688
Tags
  • founder
Green List (high evidence)
ADA2
Common Variable Immunodeficiency v1.12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Vasculitis, autoinflammation, immunodeficiency, and hematologic defects syndrome MIM#615688
  • common variable immunodeficiency
Tags
Green List (high evidence)
ADA2
Disorders of immune dysregulation v1.5
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Expert Review Green
  • Literature
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
ADA2
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Literature
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Vasculitis, autoinflammation, immunodeficiency, and haematologic defects syndrome, MIM# 615688
Tags
Green List (high evidence)
ADA2
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Vasculitis, autoinflammation, immunodeficiency, and hematologic defects syndrome MIM#615688
Tags
Green List (high evidence)
ADAM17
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Inflammatory skin and bowel disease, neonatal, 1, MIM# 614328
  • Recurrent infections
Tags
Green List (high evidence)
ADAM17
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Inflammatory skin and bowel disease, neonatal, 1, MIM# 614328
  • Recurrent infections
Tags
Green List (high evidence)
ADAR
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 6, MIM# 615010
Tags
Green List (high evidence)
ADAR
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
ADH5
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • AMED syndrome, digenic, MIM# 619151
  • Aplastic anaemia
  • myelodysplasia
  • short stature
Tags
Green List (high evidence)
AICDA
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
AICDA
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency with hyper-IgM, type 2, MIM# 605258
Tags
Green List (high evidence)
AIRE
Susceptibility to Fungal Infections v1.7
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune polyendocrinopathy syndrome , type I, with or without reversible metaphyseal dysplasia, MIM# 240300
Tags
Green List (high evidence)
AIRE
Disorders of immune dysregulation v1.5
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune polyendocrinopathy syndrome , type I, with or without reversible metaphyseal dysplasia, MIM#240300
Tags
Green List (high evidence)
AK2
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Reticular dysgenesis MIM# 267500
  • Combined immunodeficiency
  • neutropaenia
  • leukopaenia
  • lymphopaenia
  • agranulocytosis
  • deafness
  • MONDO:0009973
Tags
  • treatable
Green List (high evidence)
AK2
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Reticular dysgenesis MIM# 267500
  • MONDO:0009973
  • Combined immunodeficiency
  • neutropaenia
  • leukopaenia
  • lymphopaenia
  • agranulocytosis
  • deafness
Tags
  • treatable
Green List (high evidence)
AK2
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Reticular dysgenesis, MIM# 267500
  • MONDO:0009973
Tags
  • treatable
Green List (high evidence)
ALAS2
Bone Marrow Failure v1.112
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Anemia, sideroblastic, 1, MIM# 300751
Tags
Green List (high evidence)
ALPK1
Autoinflammatory Disorders v2.3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Retinal dystrophy, optic nerve edema, splenomegaly, anhidrosis, and migraine headache (ROSAH) syndrome, MIM#614979
  • Periodic fever, aphthous stomatitis, pharyngitis and adenitis (PFAPA) syndrome
Tags
Green List (high evidence)
ANKRD26
Bone Marrow Failure v1.112
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Thrombocytopaenia 2, MIM# 188000
Tags
  • 5'UTR
Green List (high evidence)
ANKZF1
Inflammatory bowel disease v0.122
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Infantile-onset inflammatory bowel disease, MONDO:0005265, ANKZF1-related
Tags
Green List (high evidence)
AP3B1
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
  • clinical trial
  • treatable
Green List (high evidence)
AP3D1
Disorders of immune dysregulation v1.5
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hermansky-Pudlak syndrome 10, MIM# 617050
  • Oculocutaneous albinism
  • Severe neutropaenia
  • Recurrent infections
  • Seizures
  • Hearing loss
  • Neurodevelopmental delay
Tags
Green List (high evidence)
ARPC1B
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Platelet abnormalities with eosinophilia and immune-mediated inflammatory disease 617718
Tags
  • treatable
Green List (high evidence)
ARPC5
Combined Immunodeficiency v1.114
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 133 with autoimmunity and autoinflammation, MIM# 620565
Tags
Green List (high evidence)
ARPC5
Disorders of immune dysregulation v1.5
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Literature
  • Literature
Phenotypes
  • Immunodeficiency 133 with autoimmunity and autoinflammation MIM#620565
Tags
Green List (high evidence)
ARPC5
Autoinflammatory Disorders v2.3
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Literature
  • Literature
Phenotypes
  • Immunodeficiency 133 with autoimmunity and autoinflammation, MIM# 620565
Tags
Green List (high evidence)
ATAD3A
Autoinflammatory Disorders v2.3
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • inborn error of immunity MONDO:0003778
  • Harel-Yoon syndrome MONDO:0014958
Tags
Green List (high evidence)
ATM
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Ataxia-telangiectasia MIM# 208900
  • Progressive T cell decrease, poor T-cell proliferation to mitogens
  • low IgA, IgE and IgG
  • increased IgM monomers
  • antibodies variably decreased
  • Ataxia
  • telangiectasia especially of sclerae
  • pulmonary infections
  • lymphoreticular and other malignancies
  • increased alpha fetoprotein
  • increased radiosensitivity, chromosomal instability and chromosomal translocations
Tags
Green List (high evidence)
ATP6AP1
Common Variable Immunodeficiency v1.12
2 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 47, MIM#300972
Tags
Green List (high evidence)
ATP6AP1
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 47, MIM# 300972
  • Hepatopathy
  • Leukopenia
  • Low copper
Tags
Green List (high evidence)
B2M
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 43 MIM# 241600
  • Sinopulmonary infections
  • Purple-red skin lesions
  • Decreased serum IgG
  • Decreased B cells
  • Absent β2m associated proteins MHC-I, CD1a, CD1b, and CD1c
  • MONDO:0009434
Tags
Green List (high evidence)
BACH2
Inflammatory bowel disease v0.122
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 60, MIM# 618394
  • inflammatory bowel disease
  • recurrent sinopulmonary infections
Tags
Green List (high evidence)
BACH2
Disorders of immune dysregulation v1.5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 60, MIM# 618394
  • inflammatory bowel disease
  • recurrent sinopulmonary infections
Tags
Green List (high evidence)
BCL10
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 37, MIM# 616098
Tags
Green List (high evidence)
BCL11B
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 49, MIM# 617237
  • Intellectual developmental disorder with dysmorphic facies, speech delay, and T-cell abnormalities, MIM# 618092
Tags
Green List (high evidence)
BLM
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bloom Syndrome MIM# 210900
  • Short stature, dysmorphic facies
  • sun-sensitive
  • immunoglobulin deficiency (IgA, IgG, IgM)
  • erythema
  • marrow failure
  • leukaemia
  • lymphoma
  • chromosomal instability
  • predisposition to malignancies
Tags
Green List (high evidence)
BLNK
Predominantly Antibody Deficiency v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 4, MIM# 613502
Tags
  • treatable
Green List (high evidence)
BLOC1S6
Disorders of immune dysregulation v1.5
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hermansky-Pudlak syndrome 9, MIM# 614171
Tags
Green List (high evidence)
BRCA1
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Fanconi anemia, complementation group S, MIM# 617883
Tags
Green List (high evidence)
BRCA2
Bone Marrow Failure v1.112
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group D1, MIM# 605724
Tags
Green List (high evidence)
BRIP1
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group J, MIM# 609054
Tags
  • treatable
Green List (high evidence)
BTK
Predominantly Antibody Deficiency v1.0
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia, X-linked 1, MIM# 300755
  • Isolated growth hormone deficiency, type III, with agammaglobulinaemia, MIM# 307200
Tags
  • treatable
Green List (high evidence)
BTK
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
C15orf41
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Dyserythropoietic anemia, congenital, type Ib, MIM# 615631
Tags
Green List (high evidence)
C17orf62
Phagocyte Defects v1.33
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • Chronic granulomatous disease 5, autosomal recessive, MIM# 618935
Tags
  • new gene name
Green List (high evidence)
C1QA
Complement Deficiencies v0.74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C1q deficiency, MIM# 613652
Tags
Green List (high evidence)
C1QB
Complement Deficiencies v0.74
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C1q deficiency, MIM# 613652
Tags
Green List (high evidence)
C1QC
Complement Deficiencies v0.74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C1q deficiency MIM#613652
Tags
Green List (high evidence)
C1R
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
C1S
Complement Deficiencies v0.74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C1s deficiency MIM#613783
Tags
Green List (high evidence)
C2
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
C2orf69
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Combined oxidative phosphorylation deficiency-53 (COXPD53), MIM#619423
Tags
Green List (high evidence)
C3
Complement Deficiencies v0.74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C3 deficiency MIM#613779
Tags
Green List (high evidence)
C5
Complement Deficiencies v0.74
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C5 deficiency MIM#609536
Tags
Green List (high evidence)
C6
Complement Deficiencies v0.74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C6 deficiency MIM#612446
Tags
  • treatable
Green List (high evidence)
C7
Complement Deficiencies v0.74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C7 deficiency MIM#610102
Tags
Green List (high evidence)
C8B
Complement Deficiencies v0.74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C8 deficiency, type II MIM#613789
Tags
Green List (high evidence)
C9
Complement Deficiencies v0.74
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C9 deficiency MIM#613825
Tags
Green List (high evidence)
CARD11
Predominantly Antibody Deficiency v1.0
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CARD11
Combined Immunodeficiency v1.114
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 11A, autosomal recessive, MIM# 615206
  • Immunodeficiency 11B with atopic dermatitis, autosomal dominant, MIM# 617638
Tags
Green List (high evidence)
CARD14
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Psoriasis 2, MIM# 602723
Tags
Green List (high evidence)
CARD9
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 2, autosomal recessive, MIM# 212050
  • Predisposition to invasive fungal disease, MONDO:0008905
Tags
Green List (high evidence)
CARD9
Susceptibility to Fungal Infections v1.7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 2, autosomal recessive, MIM# 212050
  • Predisposition to invasive fungal disease, MONDO:0008905
Tags
Green List (high evidence)
CARMIL2
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Early onset paediatric inflammatory bowel disease
Tags
Green List (high evidence)
CARMIL2
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 58, MIM# 618131
Tags
Green List (high evidence)
CASP10
Disorders of immune dysregulation v1.5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type II MIM#603909
Tags
Green List (high evidence)
CASP10
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type II MIM#603909
Tags
Green List (high evidence)
CBLB
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 3, MIM# 620430
Tags
Green List (high evidence)
CCBE1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hennekam lymphangiectasia- lymphoedema syndrome MIM# 235510
  • lymphangiectasia and lymphoedema
  • facial abnormalities
  • dysmorphic features
  • hypoalbuminaemia
  • intellectual disability
  • hypoglobulinaemia
Tags
Green List (high evidence)
CCR2
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Polycystic lung disease MIM#219600
Tags
Green List (high evidence)
CCR5
Susceptibility to Viral Infections v0.131
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Hepatitis C virus, resistance to} 609532
  • {HIV infection, susceptibility/resistance to}
  • {West nile virus, susceptibility to}MIM# 610379
Tags
Green List (high evidence)
CD19
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 3, MIM# 613493
Tags
Green List (high evidence)
CD19
Common Variable Immunodeficiency v1.12
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 3, MIM#613493
Tags
Green List (high evidence)
CD247
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 25, MIM# 610163
  • Absent T cells
  • Normal B cells
  • Normal NK cells
Tags
Green List (high evidence)
CD27
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 2, MIM# 615122
Tags
Green List (high evidence)
CD27
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome 2
  • CD27-deficiency MIM# 615122
  • hepatosplenomegaly
  • reduced CD8+ T-cell function
  • lymphadenopathy
  • hepatosplenomegaly
  • fever
  • increased susceptibility to EBV infection
  • aplastic anaemia
Tags
Green List (high evidence)
CD27
Common Variable Immunodeficiency v1.12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome 2
  • CD27-deficiency MIM# 615122
  • hepatosplenomegaly
  • reduced CD8+ T-cell function
  • lymphadenopathy
  • hepatosplenomegaly
  • fever
  • increased susceptibility to EBV infection
  • aplastic anaemia
Tags
Green List (high evidence)
CD27
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 2, MIM# 615122
  • Host response to EBV
Tags
Green List (high evidence)
CD3D
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 19 MIM# 615617
Tags
  • treatable
Green List (high evidence)
CD3E
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 18 MIM# 615615
Tags
  • treatable
Green List (high evidence)
CD3G
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CD3G
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 17, CD3 gamma deficient MIM# 615607
  • immune deficiency
  • autoimmunity
  • failure to thrive
  • recurrent gastrointestinal infections
  • recurrent respiratory infections
  • autoimmune haemolytic anaemia
  • Bronchiolitis obliterans
  • low CD3 complex
  • partial T lymphocytopenia
  • intractable diarrhoea.
Tags
Green List (high evidence)
CD4
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 79, MIM# 619238
  • Absence of CD4+ T cells
  • exuberant, relapsing, treatment-refractory warts
Tags
Green List (high evidence)
CD40
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency with hyper-IgM, type 3, MIM# 606843
Tags
  • treatable
Green List (high evidence)
CD40LG
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CD40LG
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, X-linked, with hyper-IgM MIM# 308230
  • Severe opportunistic infections (recurrent), idiopathic neutropaenia
  • dysgammaglobulinaemia hepatitis
  • cholangitis
  • cholangiocarcinoma
  • autoimmune blood cytopenias
  • haemolytic anaemia
  • thrombocytopaenia
  • diarrhoea
  • peripheral neuroectodermal tumours
Tags
  • treatable
Green List (high evidence)
CD46
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CD55
Complement Deficiencies v0.74
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Expert list
Phenotypes
  • Complement hyperactivation, angiopathic thrombosis, and protein-losing enteropathy, MIM# 226300
Tags
Green List (high evidence)
CD59
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
CD70
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 3, MIM# 618261
  • Host response to EBV
Tags
  • treatable
Green List (high evidence)
CD70
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 3, MIM# 618261
Tags
  • treatable
Green List (high evidence)
CD79A
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 3, MIM#613501
Tags
  • treatable
Green List (high evidence)
CD79B
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 6, MIM# 612692
Tags
  • treatable
Green List (high evidence)
CD81
Common Variable Immunodeficiency v1.12
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 6, MIM# 613496
Tags
Green List (high evidence)
CD81
Predominantly Antibody Deficiency v1.0
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 6, MIM# 613496
Tags
Green List (high evidence)
CDAN1
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyserythropoietic anemia, congenital, type Ia, 224120
Tags
Green List (high evidence)
CDC42
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neonatal-onset cytopaenia with dyshaematopoiesis
  • autoinflammation
  • rash
  • HLH
Tags
Green List (high evidence)
CDCA7
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency-centromeric instability-facial anomalies syndrome 3, MIM# 616910
Tags
Green List (high evidence)
CEBPE
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Specific granule deficiency, MIM# 245480
Tags
Green List (high evidence)
CFD
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CFH
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CFI
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CFP
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CFTR
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Cystic fibrosis, MIM# 219700
Tags
Green List (high evidence)
CHD7
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • CHARGE syndrome MIM# 214800
  • Hypogonadotropic hypogonadism 5 with or without anosmia MIM# 612370
  • Kallmann syndrome
  • hypogonadotropic hypogonadism with or without anosmia (HH)
  • Coloboma of the eye
  • heart anomaly
  • choanal atresia
  • intellectual disability
  • genital and ear anomalies, Deafness
  • Delayed pubertal development
  • CNS malformation
  • Cleft lip
  • SCID-like features
  • lymphopaenia
  • sever T-cell deficiency
  • hypogammaglobulinaemia
Tags
Green List (high evidence)
CHUK
Combined Immunodeficiency v1.114
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, CHUK-related
Tags
Green List (high evidence)
CIB1
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Epidermodysplasia verruciformis 3, MIM# 618267
  • HPV infections and cancer of the skin
Tags
Green List (high evidence)
CIB1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Epidermodysplasia verruciformis 3 618267
  • HPV infections and cancer of the skin
Tags
Green List (high evidence)
CIITA
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare Lymphocyte Syndrome, type II, complementation group A MIM# 209920
  • varied ID
  • bronchiolitis
  • pneumonia
  • severe autoimmune cytopaenia
  • CD4 T-cell lymphopaenia
  • hypogammaglobulinemia
  • absence of antigen-induced immune response
  • chronic diarrhoea
  • recurrent respiratory infections
  • recurrent gastroenteritis
  • failure to thrive
  • liver/biliary tract disease
Tags
Green List (high evidence)
CLCN7
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 4 MIM#611490
Tags
Green List (high evidence)
CLPB
Phagocyte Defects v1.33
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • 3-methylglutaconic aciduria, type VII, with cataracts, neurologic involvement and neutropaenia, MIM# 616271
  • Neutropenia, severe congenital, 9, autosomal dominant, MIM# 619813
Tags
Green List (high evidence)
CLPB
Bone Marrow Failure v1.112
2 reviews
2 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • 3-methylglutaconic aciduria, type VII, with cataracts, neurologic involvement and neutropaenia, MIM# 616271
  • 3-methylglutaconic aciduria, type VIIB, autosomal recessive, MIM# 616271
  • congenital neutropenia, 3-methylglutaconic aciduria, cataracts, severe psychomotor regression during febrile episodes, epilepsy
Tags
Green List (high evidence)
COL4A3BP
Disorders of immune dysregulation v1.5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Intellectual developmental disorder 34 (MIM#616351)
Tags
  • new gene name
Green List (high evidence)
COPA
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune interstitial lung, joint, and kidney disease, MIM 616414
Tags
Green List (high evidence)
CORO1A
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 8, MIM# 615401
Tags
  • treatable
Green List (high evidence)
CR2
Predominantly Antibody Deficiency v1.0
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 7, MIM# 614699
Tags
Green List (high evidence)
CR2
Common Variable Immunodeficiency v1.12
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 7, MIM# 614699
Tags
Green List (high evidence)
CSF2RA
Phagocyte Defects v1.33
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Surfactant metabolism dysfunction, pulmonary, 4 MIM#300770
Tags
Green List (high evidence)
CSF2RB
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Surfactant metabolism dysfunction, pulmonary, 5 MIM#614370
Tags
Green List (high evidence)
CSF3R
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Neutropaenia, severe congenital, 7, autosomal recessive, MIM# 617014
Tags
Green List (high evidence)
CSF3R
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, 7, autosomal recessive, MIM# 617014
Tags
Green List (high evidence)
CTC1
Bone Marrow Failure v1.112
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cerebroretinal microangiopathy with calcifications and cysts, MIM# 612199
Tags
Green List (high evidence)
CTLA4
Disorders of immune dysregulation v1.5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type V, MIM# 616100
Tags
Green List (high evidence)
CTLA4
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CTLA4
Common Variable Immunodeficiency v1.12
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type V, MIM# 616100
Tags
Green List (high evidence)
CTLA4
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immune dysregulation with autoimmunity, immunodeficiency, and lymphoproliferation MIM#616100
  • autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency MONDO:0014493
Tags
Green List (high evidence)
CTPS1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 24, MIM# 615897
  • Recurrent/chronic bacterial and viral infections (EBV, VZV)
  • EBV lymphoproliferation
  • B-cell non-Hodgkin lymphoma
Tags
Green List (high evidence)
CTPS1
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 24, MIM# 615897
  • Recurrent/chronic bacterial and viral infections (EBV, VZV)
  • EBV lymphoproliferation
  • B-cell non-Hodgkin lymphoma
Tags
Green List (high evidence)
CTSC
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Papillon-Lefevre syndrome, MIM# 245000
Tags
Green List (high evidence)
CXCR2
Phagocyte Defects v1.33
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • WHIM syndrome 2 619407
Tags
Green List (high evidence)
CXCR4
Common Variable Immunodeficiency v1.12
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • WHIM syndrome, MIM# 193670
Tags
Green List (high evidence)
CXCR4
Phagocyte Defects v1.33
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • WHIM syndrome 1, MIM# 193670
Tags
Green List (high evidence)
CXCR4
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • WHIM syndrome 1, MIM# 193670
Tags
Green List (high evidence)
CXCR4
Predominantly Antibody Deficiency v1.0
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CXCR4
Susceptibility to Viral Infections v0.131
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CYBA
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease 4, autosomal recessive, MIM# 233690
  • MONDO:0009308
Tags
Green List (high evidence)
CYBA
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
CYBB
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease, X-linked, MIM# 306400
Tags
Green List (high evidence)
CYBB
Phagocyte Defects v1.33
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease, X-linked, MIM# 306400
Tags
Green List (high evidence)
CYBB
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
DBR1
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Encephalitis, acute, infection (viral)-induced, susceptibility to, 11}, MIM# 619441
  • Viral infections of the brainstem
Tags
Green List (high evidence)
DBR1
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • encephalitis, acute, infection (viral)-induced, susceptibility to, 11 MONDO:0030334
Tags
Green List (high evidence)
DCLRE1B
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 8, MIM# 620133
Tags
Green List (high evidence)
DCLRE1C
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, Athabascan type MIM# 602450
  • Omenn syndrome MIM# 603554
Tags
Green List (high evidence)
DCLRE1C
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
DCLRE1C
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, Athabascan type MIM# 602450
  • Absent/reduced T and B cells
  • decreased Ig levels
  • Normal NK cell number
  • increased risk of graft rejection possibly due to activated NK cells
  • radiation sensitivity
  • failure to thrive
  • recurrent respiratory infections
  • diarrhoea
  • fever
  • hypogammmaglobulinaemia
Tags
Green List (high evidence)
DDX41
Bone Marrow Failure v1.112
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Myeloproliferative/lymphoproliferative neoplasms, familial (multiple types), susceptibility to} MIM# 616871
Tags
Green List (high evidence)
DDX58
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Lupus Nephritis, MONDO:0005556, DDX58-related
Tags
Green List (high evidence)
DEF6
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 87 and autoimmunity, MIM# 619573
  • Systemic autoimmunity
Tags
Green List (high evidence)
DIAPH1
Combined Immunodeficiency v1.114
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Seizures, cortical blindness, microcephaly syndrome, MIM# 616632
  • Combined Immune deficiency
Tags
Green List (high evidence)
DKC1
Bone Marrow Failure v1.112
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, X-linked 305000
  • Hoyeraal-Hreidarsson Syndrome
Tags
Green List (high evidence)
DKC1
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, X-linked MIM# 305000
  • Bone marrow failure, pulmonary & hepatic fibrosis, nail dystrophy, leukoplakia, reticulate skin pigmentation
  • microcephaly, immunodeficiency
  • aplastic anaemia
  • thrombocytopaenia
  • neurodevelopmental delay
  • cerebellar hypoplasia
  • opportunistic infections
Tags
Green List (high evidence)
DKC1
Inflammatory bowel disease v0.122
3 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Dyskeratosis congenita, X-linked, MIM# 305000
Tags
Green List (high evidence)
DNAJC21
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 3, MIM# 617052
  • Short stature
  • Exocrine pancreatic insufficiency
  • Pancytopaenia
  • Shwachman-Diamond syndrome
Tags
Green List (high evidence)
DNAJC21
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 3, MIM# 617052
Tags
Green List (high evidence)
DNASE1L3
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Systemic lupus erythematosus 16, MIM# 614420
Tags
Green List (high evidence)
DNASE2
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammatory-pancytopenia syndrome, MIM#619858
Tags
Green List (high evidence)
DNASE2
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammatory-pancytopaenia syndrome, MIM# 619858
Tags
Green List (high evidence)
DNMT3B
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency-centromeric instability-facial anomalies syndrome 1 MIM# 242860
  • facial dysmorphic features
  • flat nasal bridge
  • developmental delay
  • macroglossia
  • bacterial/opportunistic infections (recurrent)
  • malabsorption
  • cytopaenia
  • malignancies
  • multiradial configurations of chromosomes 1, 9, 16
  • Hypogammaglobulinaemia
  • agammaglobulinaemia
  • variable antibody deficiency
  • decreased immunoglobulin production
  • low T/B/NK cells
Tags
  • treatable
Green List (high evidence)
DNMT3B
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
  • treatable
Green List (high evidence)
DOCK11
Disorders of immune dysregulation v1.5
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune disease with immune dysregulation, X-linked (ADMIDX), MIM#301109
Tags
Green List (high evidence)
DOCK11
Inflammatory bowel disease v0.122
2 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune disease with immune dysregulation, X-linked (ADMIDX), MIM#301109
  • Inflammatory bowel disease
Tags
Green List (high evidence)
DOCK2
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 40 MIM# 616433
  • T/B-cell lymphopaenia
  • early-onset invasive herpes/viral/bacterial Infections
  • function defects in T/B/NK cells
  • immunodeficiency
  • defective IFN-mediated immunity
  • elevated IgM
  • normal IgG/IgA levels
Tags
Green List (high evidence)
DOCK8
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
DOCK8
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hyper-IgE recurrent infection syndrome, autosomal recessive MIM# 243700
  • T cell Lymphopaenia
  • decraese T/B/NK cells
  • Eosinophilia
  • low IgM
  • elevated IgE
  • recurrent cutaneous/ viral/ bacterial/ fungal/ infections
  • severe atopy/allergic disease
  • autoimmune haemolytic anaemia
  • eczema
  • cancer diathesis
Tags
Green List (high evidence)
DPP9
Disorders of immune dysregulation v1.5
4 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
  • Expert Review Green
  • Expert Review
  • Literature
Phenotypes
  • hatipoglu immunodeficiency syndrome MONDO:0957229
Tags
Green List (high evidence)
DPP9
Autoinflammatory Disorders v2.3
4 reviews
4 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
  • Expert Review Green
  • Expert Review
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome MONDO:0019751, DPP9-related
  • recurrent fevers
  • repeated infections
  • herpes susceptibility
  • cytopaenias
Tags
Green List (high evidence)
DSG1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Other
Phenotypes
  • severe dermatitis-multiple allergies-metabolic wasting syndrome MONDO:0014218
Tags
Green List (high evidence)
DUOX2
Inflammatory bowel disease v0.122
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inflammatory bowel disease, MONDO:0005265, DUOX2-related
Tags
Green List (high evidence)
DUT
Bone Marrow Failure v1.112
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure and diabetes mellitus syndrome (MIM#620044)
Tags
Green List (high evidence)
EFL1
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Shwachman-Diamond syndrome 2, MIM# 617941
Tags
Green List (high evidence)
EFL1
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Shwachman-Diamond syndrome 2, MIM# 617941
Tags
Green List (high evidence)
ELANE
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropenia, cyclic MIM#162800
Tags
Green List (high evidence)
ELANE
Phagocyte Defects v1.33
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 1, autosomal dominant, MIM# 202700
  • Neutropaenia, cyclic, MIM# 162800
Tags
Green List (high evidence)
ELANE
Bone Marrow Failure v1.112
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 1, autosomal dominant, MIM# 202700
Tags
Green List (high evidence)
ELF4
Disorders of immune dysregulation v1.5
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Autoinflammatory syndrome, familial, X-linked, Behcet-like 2 (MIM#301074)
Tags
Green List (high evidence)
EPG5
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Vici syndrome, MIM# 242840
Tags
Green List (high evidence)
ERCC4
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anemia, complementation group Q, MIM# 615272
Tags
Green List (high evidence)
ERCC6L2
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 2, MIM# 615715
Tags
Green List (high evidence)
ERCC6L2
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 2, MIM# 615715
Tags
Green List (high evidence)
ERG
Bone Marrow Failure v1.112
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Myelodysplasia syndrome, MONDO:0018881, ERG-related
Tags
Green List (high evidence)
ETV6
Bone Marrow Failure v1.112
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Thrombocytopenia 5, MIM# 616216
Tags
Green List (high evidence)
EXTL3
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunoskeletal dysplasia with neurodevelopmental abnormalities, MIM# 617425
Tags
Green List (high evidence)
F12
Hereditary angioedema v1.5
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Angioedema, hereditary, 3, MIM# 610618
Tags
  • founder
Green List (high evidence)
FADD
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • FADD-related immunodeficiency MONDO:0013408
Tags
Green List (high evidence)
FADD
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • FADD-related immunodeficiency MONDO:0013408
Tags
Green List (high evidence)
FANCA
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group A, MIM# 227650
  • MONDO:0009215
Tags
Green List (high evidence)
FANCB
Bone Marrow Failure v1.112
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group B, MIM# 300514
Tags
Green List (high evidence)
FANCC
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anemia, complementation group C, MIM# 227645
  • MONDO:0009213
Tags
Green List (high evidence)
FANCD2
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group D2, MIM# 227646
  • MONDO:0009214
Tags
Green List (high evidence)
FANCE
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group E, MIM# 600901
  • MONDO:0010953
Tags
Green List (high evidence)
FANCF
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group F 603467
  • MONDO:0011325
Tags
Green List (high evidence)
FANCG
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group G, MIM# 614082
  • MONDO:0013565
Tags
Green List (high evidence)
FANCI
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anemia, complementation group I, MIM# 609053
  • MONDO:0012186
Tags
Green List (high evidence)
FANCL
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anemia, complementation group L, MIM# 614083
  • MONDO:0013566
Tags
Green List (high evidence)
FAS
Disorders of immune dysregulation v1.5
2 reviews
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
FAS
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type IA MIM#601859
Tags
Green List (high evidence)
FASLG
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • autoimmune lymphoproliferative syndrome MONDO:0017979
Tags
Green List (high evidence)
FASLG
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type IB MIM#601859
Tags
Green List (high evidence)
FAT4
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hennekam lymphangiectasia-lymphedema syndrome 2, MIM# 616006
  • Low/variable T and B cells
  • Lymphangiectasia and lymphedema with facial abnormalities and other dysmorphic features
Tags
Green List (high evidence)
FCHO1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 76, MIM# 619164
  • Combined immunodeficiency
  • T cells: low, poor proliferation
  • B cells: normal number
  • Recurrent infections (viral, mycobacteria, bacterial, fungal)
  • lymphoproliferation
  • Failure to thrive
  • Increased activation-induced T-cell death
  • Defective clathrin-mediated endocytosis
Tags
Green List (high evidence)
FERMT1
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Kindler syndrome MONDO:0008260
Tags
Green List (high evidence)
FERMT3
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Leukocyte adhesion deficiency, type III, MIM# 612840
Tags
Green List (high evidence)
FNIP1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 93 and hypertrophic cardiomyopathy, MIM# 619705
Tags
Green List (high evidence)
FNIP1
Predominantly Antibody Deficiency v1.0
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Expert Review Green
  • Literature
Phenotypes
  • Hypertrophic Cardiomyopathy
  • Primary Immunodeficiency
  • Agammaglobulinemia
  • Neutropenia
  • Immunodeficiency 93 and hypertrophic cardiomyopathy, MIM# 619705
Tags
Green List (high evidence)
FOXN1
Severe Combined Immunodeficiency (absent T present B cells) v1.9
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • T-cell immunodeficiency, congenital alopecia, and nail dystrophy, autosomal recessive MIM# 601705
  • T-cell lymphopenia, infantile, with or without nail dystrophy, autosomal dominan, MIM#t 618806
Tags
Green List (high evidence)
FOXN1
Combined Immunodeficiency v1.114
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • T-cell immunodeficiency, congenital alopecia, and nail dystrophy, autosomal recessive MIM# 601705
  • T-cell lymphopenia, infantile, with or without nail dystrophy, autosomal dominan, MIM#t 618806
Tags
Green List (high evidence)
FOXP3
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
FOXP3
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
  • treatable
Green List (high evidence)
G6PC3
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
G6PC3
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 4, autosomal recessive, MIM# 612541
  • MONDO:0012930
  • Dursun syndrome, MIM# 612541
Tags
Green List (high evidence)
G6PC3
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 4, autosomal recessive, MIM# 612541
  • MONDO:0012930
  • Dursun syndrome, MIM# 612541
Tags
Green List (high evidence)
G6PD
Phagocyte Defects v1.33
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hemolytic anemia, G6PD deficient (favism), MIM# 300908
Tags
Green List (high evidence)
GALE
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Thrombocytopenia 12, syndromic, MIM#620776
Tags
Green List (high evidence)
GATA1
Bone Marrow Failure v1.112
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
Phenotypes
  • Thrombocytopaenia, X-linked, with or without dyserythropoietic anaemia, MIM# 300367
Tags
Green List (high evidence)
GATA2
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 21, MIM# 614172
  • GATA2 deficiency with susceptibility to MDS/AML MONDO:0042982
  • Emberger syndrome, MIM# 614038
  • Deafness-lymphoedema-leukaemia syndrome MONDO:0013540
Tags
  • treatable
Green List (high evidence)
GATA2
Disorders of immune dysregulation v1.5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • GATA2 deficiency with susceptibility to MDS/AML (MONDO:0042982)
Tags
  • treatable
Green List (high evidence)
GATA2
Phagocyte Defects v1.33
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Emberger syndrome, MIM# 614038
Tags
Green List (high evidence)
GFI1
Phagocyte Defects v1.33
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 2, autosomal dominant, MIM# 613107
Tags
  • treatable
Green List (high evidence)
GFI1
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 2, autosomal dominant, MIM# 613107
Tags
  • treatable
Green List (high evidence)
GIMAP5
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • portal hypertension, noncirrhotic, 2 MONDO:0030397
Tags
Green List (high evidence)
GIMAP5
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Portal hypertension, noncirrhotic, 2, MIM# 619463
Tags
Green List (high evidence)
GIMAP6
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome MONDO:0019751, GIMAP6-related
Tags
Green List (high evidence)
GINS1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 55, MIM#617827
Tags
Green List (high evidence)
GLRX5
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Anaemia, sideroblastic, 3, pyridoxine-refractory, MIM# 616860
Tags
Green List (high evidence)
GUCY2C
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
HAVCR2
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • T-cell lymphoma, subcutaneous panniculitis-like, MIM# 618398
Tags
Green List (high evidence)
HAVCR2
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • T-cell lymphoma, subcutaneous panniculitis-like, MIM# 618398
Tags
Green List (high evidence)
HAX1
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 3, autosomal recessive, MIM# 610738
  • Kostmann syndrome MONDO:0012548
Tags
Green List (high evidence)
HAX1
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 3, autosomal recessive, MIM# 610738
  • Kostmann syndrome MONDO:0012548
Tags
Green List (high evidence)
HEATR3
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Diamond-Blackfan anaemia 21, MIM# 620072
Tags
Green List (high evidence)
HELLS
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency-centromeric instability-facial anomalies syndrome 4, MIM#616911
Tags
Green List (high evidence)
HMOX1
Defects of intrinsic and innate immunity v1.19
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Heme oxygenase-1 deficiency, MIM# 614034
  • Asplenia
Tags
Green List (high evidence)
HPS1
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
HPS4
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
HPS6
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
HTRA2
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • 3-methylglutaconic aciduria, type VIII, MIM# 617248
Tags
Green List (high evidence)
HYOU1
Phagocyte Defects v1.33
3 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 59 and hypoglycemia, MIM# 233600
Tags
Green List (high evidence)
ICOS
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
ICOS
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 1 MIM# 607594
  • recurrent bacterial respiratory/gastrointestinal infections
  • autoimmunity
  • gastroenteritis
  • low IgG/IgA
  • normal-low IgM
  • hypogammaglobulinaemia
  • low-normal B-cells
  • normal T-cells
  • Bronchitis
  • Lymphadenopathy
  • Hepatomegaly
  • Diarrhoea
Tags
  • SV/CNV
Green List (high evidence)
ICOS
Common Variable Immunodeficiency v1.12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 1 MIM# 607594
  • recurrent bacterial respiratory/gastrointestinal infections
  • autoimmunity
  • gastroenteritis
  • low IgG/IgA
  • normal-low IgM
  • hypogammaglobulinaemia
  • low-normal B-cells
  • normal T-cells
  • Bronchitis
  • Lymphadenopathy
  • Hepatomegaly
  • Diarrhoea
Tags
Green List (high evidence)
IFIH1
Autoinflammatory Disorders v2.3
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 7, MIM# 615846
Tags
Green List (high evidence)
IFIH1
Disorders of immune dysregulation v1.5
3 reviews
3 green
Unknown
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
IFIH1
Inflammatory bowel disease v0.122
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inflammatory Bowel Disease
Tags
Green List (high evidence)
IFIH1
Susceptibility to Viral Infections v0.131
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Severe viral respiratory infections
  • Rhinovirus and other RNA viruses
Tags
Green List (high evidence)
IFIH1
Defects of intrinsic and innate immunity v1.19
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 95 MIM#619773
Tags
Green List (high evidence)
IFNAR1
Defects of intrinsic and innate immunity v1.19
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • immunodeficiency 106, susceptibility to viral infections MONDO:0030970
Tags
Green List (high evidence)
IFNAR1
Susceptibility to Viral Infections v0.131
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 106, susceptibility to viral infections, MIM# 619935
  • Severe disease caused by Yellow Fever vaccine and Measles vaccine
Tags
Green List (high evidence)
IFNAR2
Susceptibility to Viral Infections v0.131
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 45, MIM# 616669
Tags
Green List (high evidence)
IFNAR2
Defects of intrinsic and innate immunity v1.19
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • immunodeficiency 45 MONDO:0014727
Tags
Green List (high evidence)
IFNGR1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 27A, mycobacteriosis, AR, MIM# 209950
  • Immunodeficiency 27B, mycobacteriosis, AD, MIM# 615978
Tags
Green List (high evidence)
IFNGR2
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 28, mycobacteriosis, MIM# 614889
Tags
Green List (high evidence)
IGHM
Predominantly Antibody Deficiency v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Agammaglobulinemia 1, MIM# 601495
Tags
Green List (high evidence)
IGLL1
Predominantly Antibody Deficiency v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 2, MIM# 613500
Tags
Green List (high evidence)
IKBKB
Combined Immunodeficiency v1.114
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 15A, autosomal dominant, MIM# 618204
  • Immunodeficiency 15B, autosomal recessive, MIM# 615592
Tags
Green List (high evidence)
IKBKG
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Ectodermal dysplasia and immunodeficiency 1 MIM# 300291
  • Immunodeficiency 33 MIM# 300636
Tags
Green List (high evidence)
IKBKG
Autoinflammatory Disorders v2.3
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammatory disease, systemic, X-linked, MIM# 301081
Tags
Green List (high evidence)
IKBKG
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
IKZF1
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 13 MIM# 616873
  • recurrent bacterial respiratory infections
  • Thrombocytopaenia
  • immunodeficiency
  • Hypogammaglobulinaemia
  • decrease B-cells
  • decrease B-cell differentiation
  • decrease memory B/T cells
  • Low Ig
  • pneumocystis early CID onset
Tags
Green List (high evidence)
IKZF1
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 13, MIM# 616873
  • Low IgG, IgA, IgM, low or normal B cells
  • B cells and Ig levels reduce with age
  • Decreased pro-B cells
  • Recurrent sinopulmonary infections
  • Increased risk of ALL, autoimmunity
Tags
Green List (high evidence)
IKZF1
Common Variable Immunodeficiency v1.12
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 13 MIM# 616873
  • recurrent bacterial respiratory infections
  • Thrombocytopaenia
  • immunodeficiency
  • Hypogammaglobulinaemia
  • decrease B-cells
  • decrease B-cell differentiation
  • decrease memory B/T cells
  • Low Ig
  • pneumocystis early CID onset
Tags
Green List (high evidence)
IKZF1
Disorders of immune dysregulation v1.5
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Immune dysregulation
Tags
Green List (high evidence)
IKZF2
Combined Immunodeficiency v1.114
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • HELIOS deficiency MONDO:0800139
Tags
Green List (high evidence)
IKZF2
Disorders of immune dysregulation v1.5
3 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency, MONDO:0021094, IKZF2-related
  • Immune dysregulation
Tags
Green List (high evidence)
IKZF3
Combined Immunodeficiency v1.114
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 84, MIM# 619437
Tags
Green List (high evidence)
IL10
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
IL10
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Diseases of Immune Dysregulation
  • Early-onset inflammatory bowel disease
Tags
Green List (high evidence)
IL10RA
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
IL10RA
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Inflammatory bowel disease 28, early onset, autosomal recessive, MIM# 613148
Tags
Green List (high evidence)
IL10RB
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
IL10RB
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Inflammatory bowel disease 25, early onset, autosomal recessive, MIM# 612567
Tags
Green List (high evidence)
IL12B
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 29, mycobacteriosis, MIM# 614890
Tags
Green List (high evidence)
IL12RB1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 30, MIM# 614891
Tags
Green List (high evidence)
IL17RA
Susceptibility to Fungal Infections v1.7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 51, MIM# 613953
  • MONDO:0013500
Tags
Green List (high evidence)
IL17RA
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 51, MIM# 613953
  • MONDO:0013500
Tags
Green List (high evidence)
IL17RC
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 9, MIM# 616445
  • MONDO:0014642
Tags
Green List (high evidence)
IL17RC
Susceptibility to Fungal Infections v1.7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 9, MIM# 616445
  • MONDO:0014642
Tags
Green List (high evidence)
IL1RN
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Interleukin 1 receptor antagonist deficiency, MIM# 612852
Tags
Green List (high evidence)
IL21R
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 56, MIM# 615207
Tags
Green List (high evidence)
IL23R
Defects of intrinsic and innate immunity v1.19
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency disease, MONDO:0021094
  • Susceptibility to mycobacteria and Salmonella
Tags
Green List (high evidence)
IL2RA
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
IL2RA
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
IL2RB
Inflammatory bowel disease v0.122
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Immunodeficiency 63 with lymphoproliferation and autoimmunity, MIM# 618495
Tags
Green List (high evidence)
IL2RB
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 63 with lymphoproliferation and autoimmunity, MIM# 618495
  • Lymphoproliferation, lymphadenopathy, hepatosplenomegaly, autoimmune haemolytic anaemia, dermatitis, enteropathy, hypergammaglobulinaemia, recurrent viral (EBV, CMV) infections
Tags
  • treatable
Green List (high evidence)
IL2RG
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
IL2RG
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Combined immunodeficiency, X-linked, moderate MIM# 312863
  • Severe combined immunodeficiency, X-linked MIM# 300400
  • recurrent viral/fungal/bacterial infections
  • Low T/NK cells
  • Low Ig levels
  • lymphocytopaenia
  • hypogammaglobulinaemia
  • failure to thrive
  • diarrhoea
  • Pneumonia
  • Thymic hypoplasia
Tags
Green List (high evidence)
IL2RG
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Combined immunodeficiency, X-linked, moderate MIM# 312863
  • Severe combined immunodeficiency, X-linked MIM# 300400
  • recurrent viral/fungal/bacterial infections
  • Low T/NK cells
  • Low Ig levels
  • lymphocytopaenia
  • hypogammaglobulinaemia
  • failure to thrive
  • diarrhoea
  • Pneumonia
  • Thymic hypoplasia
Tags
Green List (high evidence)
IL36RN
Autoinflammatory Disorders v2.3
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Psoriasis 14, pustular, MIM# 614204
  • Autoinflammatory syndrome, MONDO:0019751, IL36RN-related
Tags
Green List (high evidence)
IL6ST
Combined Immunodeficiency v1.114
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Literature
  • Expert Review Green
  • Expert list
Phenotypes
  • Hyper-IgE recurrent infection syndrome 4, autosomal recessive, MIM# 618523
  • Stuve-Wiedemann syndrome 2, MIM# 619751: skeletal dysplasia, neonatal lung dysfunction, thrombocytopenia, dermatitis, defective acute-phase response
  • Hyper-IgE syndrome, autosomal dominant
Tags
Green List (high evidence)
IL7
Combined Immunodeficiency v1.114
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, IL7-related
Tags
Green List (high evidence)
IL7R
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • severe combined immunodeficiency 104 MIM#608971
Tags
Green List (high evidence)
IL7R
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • severe combined immunodeficiency 104 MIM#608971
Tags
Green List (high evidence)
IPO8
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Vascular aneurysm, immune dysregulation, skeletal anomalies, and skin and joint laxity, MIM# 619472
  • Loeys-Dietz syndrome-like
  • cardiovascular, neurologic, skeletal and immunologic abnormalities
Tags
Green List (high evidence)
IRAK4
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, MONDO:0019751, IRAK4-related
Tags
Green List (high evidence)
IRAK4
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 67, MIM# 607676
Tags
Green List (high evidence)
IRF1
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Literature
Phenotypes
  • Immunodeficiency 117, mycobacteriosis, autosomal recessive, MIM# 620668
Tags
Green List (high evidence)
IRF2BP2
Common Variable Immunodeficiency v1.12
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 14 MIM#617765
Tags
Green List (high evidence)
IRF2BP2
Predominantly Antibody Deficiency v1.0
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 14, MIM# 617765
Tags
Green List (high evidence)
IRF4
Defects of intrinsic and innate immunity v1.19
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • combined immunodeficiency MONDO:0015131
Tags
Green List (high evidence)
IRF4
Combined Immunodeficiency v1.114
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, IRF4-related
Tags
Green List (high evidence)
IRF7
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 39, MIM# 616345
Tags
Green List (high evidence)
IRF7
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 39, MIM# 616345
Tags
Green List (high evidence)
IRF8
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 32A, mycobacteriosis, autosomal dominant, MIM# 614893
  • Immunodeficiency 32B, monocyte and dendritic cell deficiency, autosomal recessive, MIM# 226990
Tags
Green List (high evidence)
ISG15
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 38, MIM# 616126
Tags
Green List (high evidence)
ITCH
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
ITGB2
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Leukocyte adhesion deficiency, MIM# 116920
Tags
Green List (high evidence)
ITGB2
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
ITK
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 1, MIM# 613011
  • EBV associated B call lymphoproliferation, lymphoma
Tags
Green List (high evidence)
ITK
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome 1 MIM# 613011
  • Lymphadenopathy
  • Recurrent infections
  • Hypogammaglobulinaemia
  • Evidence of EBV infection
  • EBV associated B cell Lymphoproliferation
  • High EBV viral load
  • Normal-low serum Ig
  • Depleted CD4+ T cells
  • Anaemia
  • Thrombocytopaenia
  • Hepatosplenomegaly
Tags
Green List (high evidence)
ITK
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 1, MIM# 613011
  • EBV- associated B cell lymphoproliferation, lymphoma
Tags
Green List (high evidence)
ITK
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Lymphoproliferative syndrome 1 MIM#613011
Tags
Green List (high evidence)
ITPR3
Combined Immunodeficiency v1.114
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, ITPR3-related
Tags
Green List (high evidence)
IVNS1ABP
Combined Immunodeficiency v1.114
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 70, MIM#618969
Tags
Green List (high evidence)
JAGN1
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, 6, autosomal recessive, MIM# 616022
Tags
Green List (high evidence)
JAGN1
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Neutropenia, severe congenital, 6, autosomal recessive, MIM# 616022
Tags
Green List (high evidence)
JAK1
Disorders of immune dysregulation v1.5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Eosinophilia
  • Eosinophilic enteritis
  • Thyroid disease
  • Poor growth
  • Viral infections
  • Viral infections
  • Autoinflammation, immunde dysregulation, and eosinophilia, MIM# 618999
Tags
Green List (high evidence)
JAK1
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammation, immunde dysregulation, and eosinophilia, MIM# 618999
Tags
Green List (high evidence)
JAK3
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • SCID, autosomal recessive, T-negative/B-positive type MIM# 600802
Tags
  • treatable
Green List (high evidence)
KARS
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • leukoencephalopathy, progressive, infantile-onset, with or without deafness MONDO:0030893
Tags
Green List (high evidence)
KDM6A
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Kabuki syndrome 2 MIM#300867
Tags
Green List (high evidence)
KLF1
Bone Marrow Failure v1.112
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyserythropoietic anaemia, congenital, type IVa, MIM# 613673
  • MONDO:0013355
  • Anaemia, congenital dyserythropoietic, type IVb, MIM#620969
Tags
Green List (high evidence)
KMT2D
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Kabuki syndrome 1 MIM#147920
Tags
Green List (high evidence)
KRAS
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • RAS-associated autoimmune leukoproliferative disorder MIM#614470
Tags
Green List (high evidence)
LACC1
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Literature
Phenotypes
  • juvenile arthritis due to defect in LACC1 MONDO:0032920
Tags
Green List (high evidence)
LAT
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 52, MIM# 617514
Tags
Green List (high evidence)
LCK
Combined Immunodeficiency v1.114
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 22 MIM# 615758
  • Recurrent infections
  • Immune dysregulation
  • autoimmunity
  • Low CD4+
  • low CD8+
  • restricted T cell repertoire
  • poor TCR signaling
  • Normal IgG/IgA
  • high IgM
  • failure to thrive
  • diarrhoea
  • lymphopenia
  • hypogammaglobulinemia
  • anaemia
  • thrombocytopaenia
  • CD4+ T-cell lymphopenia
Tags
Green List (high evidence)
LCP2
Combined Immunodeficiency v1.114
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 81, MIM# 619374
Tags
Green List (high evidence)
LIG1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Combined immunodeficiency
  • Lymphopaenia
  • Hypogammaglobulinaemia
  • Recurrent bacterial and viral infections
  • Growth retardation
  • Sun sensitivity, radiation sensitivity
  • Macrocytosis
Tags
Green List (high evidence)
LIG1
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 96, MIM# 619774
Tags
Green List (high evidence)
LIG4
Combined Immunodeficiency v1.114
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • LIG4 syndrome MIM# 606593
  • T-/B- lymphocytopaenia
  • Normal NK, radiation sensitivity
  • Microcephaly
  • low B/C cells
  • low Ig
  • raised IgM
  • failure to thrive
  • bacterial/viral/fungal infections
  • hypogammaglobulinaemia
  • neurodevelopmental delay
  • microcephaly
  • pancytopaenia
Tags
  • treatable
Green List (high evidence)
LIG4
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • LIG4 syndrome, MIM# 606593
  • DNA ligase IV deficiency, MONDO:0011686
Tags
  • treatable
Green List (high evidence)
LIG4
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • LIG4 syndrome MIM# 606593
  • T-/B-lymphocytopaenia
  • Normal NK, radiation sensitivity
  • Microcephaly
  • absent/low B and T cells
  • low Ig
  • raised IgM
  • failure to thrive
  • bacterial/viral/fungal infections
  • hypogammaglobulinaemia
  • neurodevelopmental delay
  • microcephaly
  • pancytopaenia
Tags
  • treatable
Green List (high evidence)
LIG4
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • LIG4 syndrome, MIM# 606593
Tags
Green List (high evidence)
LIG4
Disorders of immune dysregulation v1.5
4 reviews
4 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • LIG4 syndrome, MIM# 606593
  • Immune dysregulation
Tags
Green List (high evidence)
LPIN2
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Majeed syndrome, MIM# 609628
  • Chronic recurrent multifocal osteomyelitis with congenital dyserythropoietic anaemia
Tags
Green List (high evidence)
LRBA
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Literature
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 8, with autoimmunity, MIM# 614700
  • Recurrent infections
  • Inflammatory bowel disease
  • Autoimmunity
  • EBV infections
Tags
Green List (high evidence)
LRBA
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency, common variable, 8, with autoimmunity MIM#614700
Tags
Green List (high evidence)
LRBA
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
LRBA
Common Variable Immunodeficiency v1.12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency, common variable, 8, with autoimmunity MIM#614700
Tags
Green List (high evidence)
LRBA
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 8, with autoimmunity MIM# 614700
  • Normal-decreased CD4 numbers
  • T cell dysregulation
  • Low-normal B cells
  • Reduced IgG and IgA
  • Recurrent infections
  • chronic diarrhoea
  • inflammatory bowel disease
  • hypogammaglobulinaemia
  • pneumonitis
  • autoimmune disorders
  • thrombocytopaenia
Tags
Green List (high evidence)
LYN
Disorders of immune dysregulation v1.5
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory disease, systemic, with vasculitis, MIM# 620376
Tags
Green List (high evidence)
LYN
Autoinflammatory Disorders v2.3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory disease, systemic, with vasculitis MONDO:0957271
Tags
Green List (high evidence)
LYST
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
  • treatable
Green List (high evidence)
MAGT1
Susceptibility to Viral Infections v0.131
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia, MIM# 300853
Tags
Green List (high evidence)
MAGT1
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia MIM#300853
Tags
Green List (high evidence)
MAGT1
Disorders of immune dysregulation v1.5
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia, MIM# 300853
Tags
Green List (high evidence)
MAGT1
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia MIM# 300853
  • XMEN
  • Low CD4
  • inverted CD4/CD8 ratio
  • reduced MAIT cells
  • poor proliferation to CD3
  • decreased memory B cells
  • progressive hypogammaglobulinaemia
  • reduced NK cell
  • EBV infection
  • lymphoma
  • viral infections
  • respiratory and GI infections
  • Glycosylation defects
Tags
Green List (high evidence)
MALT1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 12 MIM# 615468
  • poor T-cell proliferation
  • normal T/B cell numbers
  • poor specific antibody response
  • recurrent bacterial/fungal/viral infections
  • bronchiectasis
  • failure to thrive
Tags
Green List (high evidence)
MAP3K14
Combined Immunodeficiency v1.114
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 112, MIM# 620449
  • NIK deficiency
  • Poor T cell proliferation to antigen
  • Low B-cell numbers
  • Low NK number and function
  • recurrent bacterial/viral/ cryptosporidium infections
  • hypogammaglobulinaemia
  • decreased immunoglobulin levels
Tags
Green List (high evidence)
MAP3K14
Common Variable Immunodeficiency v1.12
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 112, MIM# 620449
Tags
Green List (high evidence)
MBD4
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
  • Literature
Phenotypes
  • Tumor predisposition syndrome 2 - MIM#619975
  • Adenomatous colorectal polyposis, myelodysplastic syndrome, acute myeloid leukemia, and uveal melanoma
Tags
Green List (high evidence)
MCTS1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
  • Literature
Phenotypes
  • Inherited susceptibility to mycobacterial diseases, MONDO:0019146, MCTS1-related
Tags
Green List (high evidence)
MECOM
Bone Marrow Failure v1.112
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Radioulnar synostosis with amegakaryocytic thrombocytopenia 2, MIM#616738
  • Bone marrow failure without radioulnar synostosis (RUS)
Tags
Green List (high evidence)
MEFV
Autoinflammatory Disorders v2.3
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Familial Mediterranean fever, AD, MIM# 134610
  • Familial Mediterranean fever, AR, MIM# 249100
  • Neutrophilic dermatosis, MIM#608068
Tags
Green List (high evidence)
MEFV
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
MOGS
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Congenital disorder of glycosylation, type IIb, MIM# 606056
  • Severe hypogammaglobulinaemia
  • Bacterial and viral infections
  • Severe neurologic disease
Tags
Green List (high evidence)
MOGS
Predominantly Antibody Deficiency v1.0
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Congenital disorder of glycosylation, type IIb, MIM# 606056
Tags
Green List (high evidence)
MOGS
Common Variable Immunodeficiency v1.12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Congenital disorder of glycosylation, type IIb MIM#606056
  • Mannosyl-oligosaccharide glucosidase deficiency (MOGS)
Tags
Green List (high evidence)
MPEG1
Phagocyte Defects v1.33
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 77, MIM# 619223
Tags
Green List (high evidence)
MPIG6B
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Thrombocytopenia, anemia, and myelofibrosis, MIM# 617441
Tags
Green List (high evidence)
MPL
Bone Marrow Failure v1.112
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Myelofibrosis with myeloid metaplasia, somatic, MIM#254450
  • Thrombocythemia 2, MIM#601977, AD, SMu
  • Thrombocytopenia, congenital amegakaryocytic, MIM#604498, AR
Tags
Green List (high evidence)
MSN
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 50, MIM# 300988
Tags
Green List (high evidence)
MSN
Phagocyte Defects v1.33
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Phenotypes
  • Immunodeficiency 50, MIM# 300988
Tags
Green List (high evidence)
MSN
Susceptibility to Viral Infections v0.131
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 50, MIM# 300988
Tags
Green List (high evidence)
MTHFD1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinaemia MIM # 617780
  • Decreased Ig levels
  • poor antibody responses to conjugated polysaccharide antigens
  • low B/T/NK cells
  • Recurrent bacterial infection
  • megaloblastic anaemia
  • failure to thrive
  • neutropenia
  • seizures
  • intellectual disability
  • folate-responsive
  • Lymphopaenia
Tags
Green List (high evidence)
MVK
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
MVK
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hyper-IgD syndrome (MIM#260920)
  • Mevalonic aciduria (MIM#610377)
Tags
Green List (high evidence)
MYD88
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 68, MIM# 612260
Tags
Green List (high evidence)
MYH9
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss, MIM# 155100
Tags
Green List (high evidence)
MYSM1
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 4, MIM#618116
Tags
  • treatable
Green List (high evidence)
MYSM1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 4, MIM#618116
Tags
  • treatable
Green List (high evidence)
NAF1
Bone Marrow Failure v1.112
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pulmonary fibrosis and/or bone marrow failure syndrome, telomere-related, 7, MIM# 620365
Tags
Green List (high evidence)
NBAS
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Short stature, optic nerve atrophy, and Pelger-Huet anomaly MIM#614800
  • Infantile liver failure syndrome 2 MIM#616483
Tags
Green List (high evidence)
NBAS
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemophagocytic lymphohistiocytosis (HLH), MONDO:0015541
Tags
Green List (high evidence)
NBEAL2
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Gray platelet syndrome, MIM# 139090
  • Immune dysregulation
Tags
Green List (high evidence)
NBEAL2
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
Phenotypes
  • Gray platelet syndrome, MIM# 139090
Tags
Green List (high evidence)
NBN
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Nijmegen breakage syndrome, MIM#251260
  • Aplastic anemia, MIM#609135
  • Leukemia, acute lymphoblastic, MIM#613065
Tags
Green List (high evidence)
NBN
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Nijmegen breakage syndrome, MIM#251260
Tags
Green List (high evidence)
NCF1
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
NCF1
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease 1, autosomal recessive, MIM# 233700
Tags
Green List (high evidence)
NCF2
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease 2, autosomal recessive, MIM# 233710
Tags
Green List (high evidence)
NCF2
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease 2, autosomal recessive, MIM# 233710
Tags
Green List (high evidence)
NCF4
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type III MIM#613960
Tags
Green List (high evidence)
NCKAP1L
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Literature
  • Literature
Phenotypes
  • immunodeficiency 72 with autoinflammation MONDO:0033551
Tags
Green List (high evidence)
NCKAP1L
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Literature
Phenotypes
  • Immunodeficiency
  • Immune dysregulation
  • Immunodeficiency 72 with autoinflammation, MIM# 618982
Tags
Green List (high evidence)
NCSTN
Defects of intrinsic and innate immunity v1.19
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Acne inversa, familial, 1 MIM#142690
Tags
Green List (high evidence)
NFE2L2
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, developmental delay, and hypohomocysteinemia, MIM# 617744
  • Recurrent respiratory and skin infection
  • Growth retardation
  • Developmental delay, borderline ID
  • White matter cerebral lesions
Tags
Green List (high evidence)
NFKB1
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 12 MIM# 616576
  • Normal-low IgG, IgA, IgM
  • low-normal B cells
  • low switched memory B cells
  • hypogammaglobulinaemia
  • recurrent respiratory and gastrointestinal infections
  • Chronic obstructive pulmonary disease COPD
  • EBV proliferation
  • autoimmunity
  • alopecia
Tags
Green List (high evidence)
NFKB1
Predominantly Antibody Deficiency v1.0
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 12 MIM# 616576
  • Normal-low IgG, IgA, IgM
  • low-normal B cells
  • low switched memory B cells
  • hypogammaglobulinaemia
  • recurrent respiratory and gastrointestinal infections
  • Chronic obstructive pulmonary disease COPD
  • EBV proliferation
  • autoimmunity
  • alopecia
Tags
Green List (high evidence)
NFKB1
Common Variable Immunodeficiency v1.12
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 12 MIM# 616576
  • Normal-low IgG, IgA, IgM
  • low-normal B cells
  • low switched memory B cells
  • hypogammaglobulinaemia
  • recurrent respiratory and gastrointestinal infections
  • Chronic obstructive pulmonary disease COPD
  • EBV proliferation
  • autoimmunity
  • alopecia
Tags
Green List (high evidence)
NFKB2
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 10 MIM# 615577
  • Low serum IgG, IgA, IgM
  • low B cell numbers
  • low switched memory B cells
  • Recurrent sinopulmonary infections, Alopecia
  • endocrinopathies
  • ACTH deficiency
Tags
Green List (high evidence)
NFKB2
Predominantly Antibody Deficiency v1.0
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 10 MIM# 615577
  • Low serum IgG, IgA, IgM
  • low B cell numbers
  • low switched memory B cells
  • Recurrent sinopulmonary infections, Alopecia
  • endocrinopathies
  • ACTH deficiency
Tags
Green List (high evidence)
NFKB2
Common Variable Immunodeficiency v1.12
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 10 MIM# 615577
  • Low serum IgG, IgA, IgM
  • low B cell numbers
  • low switched memory B cells
  • Recurrent sinopulmonary infections, Alopecia
  • endocrinopathies
  • ACTH deficiency
Tags
Green List (high evidence)
NFKBIA
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Ectodermal dysplasia and immunodeficiency 2 MIM# 612132
  • Ectodermal dysplasia
  • TCR/ BCR activation impaired
  • low memory and isotype switched B cells
  • decreased IgG and IgA
  • elevated IgM
  • poor specific antibody responses
  • diarrhoea
  • agammaglobulinaemia
  • ectodermal dysplasia
  • recurrent respiratory and gastrointestinal infections
  • colitis
  • variable defects of skin, hair and teeth
Tags
Green List (high evidence)
NHEJ1
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency with microcephaly, growth retardation, and sensitivity to ionizing radiation, MIM# 611291
  • MONDO:0012650
Tags
Green List (high evidence)
NHP2
Combined Immunodeficiency v1.114
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 2 MIM# 613987
  • Shortened telomeres
  • Leukoplakia
  • Nail dystrophy
  • Bone marrow failure
  • Pancytopaenia
  • reticulate skin pigmentation
  • Thrombocytopaenia
  • recurrent opportunistic infections
Tags
Green List (high evidence)
NHP2
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 2, MIM# 613987
Tags
Green List (high evidence)
NLRC4
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Familial cold autoinflammatory syndrome 4 - MIM#616115
  • Autoinflammation with infantile enterocolitis - MIM#616050
Tags
Green List (high evidence)
NLRP1
Autoinflammatory Disorders v2.3
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammation with arthritis and dyskeratosis, MIM# 617388
  • Palmoplantar carcinoma, multiple self-healing 615225
  • Recurrent respiratory papillomatosis
Tags
Green List (high evidence)
NLRP12
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Familial cold autoinflammatory syndrome 2 - MIM#611762
Tags
Green List (high evidence)
NLRP3
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Familial cold inflammatory syndrome 1, MIM# 120100
  • Deafness, autosomal dominant 34, with or without inflammation, MIM# 617772
  • CINCA syndrome, MIM#12032915 607115
Tags
Green List (high evidence)
NOD2
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Blau syndrome, MIM# 186580
Tags
Green List (high evidence)
NOD2
Inflammatory bowel disease v0.122
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • {Inflammatory bowel disease 1, Crohn disease} 266600
  • {Yao syndrome} 617321
Tags
Green List (high evidence)
NPM1
Bone Marrow Failure v1.112
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • radial ray defects
  • short stature
  • nail dsytrophy
  • bone marrow failure
Tags
Green List (high evidence)
NRAS
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • autoimmune lymphoproliferative syndrome type 4 MONDO:0013767
Tags
Green List (high evidence)
NUDCD3
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Severe combined immunodeficiency
  • omenn syndrome
Tags
Green List (high evidence)
OAS1
Predominantly Antibody Deficiency v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 100 with pulmonary alveolar proteinosis and hypogammaglobulinaemia, MIM#618042
Tags
Green List (high evidence)
OAS1
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 100 with pulmonary alveolar proteinosis and hypogammaglobulinaemia, MIM#618042
Tags
Green List (high evidence)
OAS2
Susceptibility to Viral Infections v0.131
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Multisystem inflammatory syndrome, MONDO:0035375, OAS2-related
Tags
Green List (high evidence)
OAS2
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Literature
Phenotypes
  • Multisystem inflammatory syndrome, MONDO:0035375, OAS2-related
Tags
Green List (high evidence)
ORAI1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 9, MIM# 612782
Tags
Green List (high evidence)
OSTM1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 5 MIM#259720
Tags
Green List (high evidence)
OTULIN
Phagocyte Defects v1.33
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 107, susceptibility to invasive staphylococcus aureus infection, MIM# 619986
Tags
Green List (high evidence)
OTULIN
Autoinflammatory Disorders v2.3
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoinflammation, panniculitis, and dermatosis syndrome, autosomal dominant, MIM# 621030
  • Autoinflammation, panniculitis, and dermatosis syndrome, autosomal recessive, MIM# 617099
Tags
Green List (high evidence)
OTULIN
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammation, panniculitis, and dermatosis syndrome, MIM# 617099
Tags
Green List (high evidence)
PALB2
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia, complementation group N, MIM# 610832
Tags
Green List (high evidence)
PARN
Bone Marrow Failure v1.112
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 6, MIM# 616353
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 4, MIM# 616371
Tags
Green List (high evidence)
PARN
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 6, MIM# 616353
Tags
Green List (high evidence)
PAX1
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Syndromic SCID
  • dysmorphism
  • ear abnormalities
  • Otofaciocervical syndrome 2, MIM# 615560
Tags
Green List (high evidence)
PEPD
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • NHS GMS
  • Expert Review Green
  • Expert list
Phenotypes
  • Prolidase deficiency, MIM#170100
Tags
Green List (high evidence)
PGM3
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 23, MIM# 615816
  • PGM3-CDG, MONDO:0014353
Tags
Green List (high evidence)
PIK3CD
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 14, MIM# 615513
Tags
Green List (high evidence)
PIK3CD
Common Variable Immunodeficiency v1.12
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 14B, autosomal recessive, MIM# 619281
  • Immunodeficiency 14A, autosomal dominant, MIM# 615513
Tags
Green List (high evidence)
PIK3CD
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
PIK3CG
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 97 with autoinflammation, MIM# 619802
  • Immune dysregulation
  • HLH-like
  • childhood-onset antibody defects
  • cytopenias
  • T lymphocytic pneumonitis and colitis
Tags
Green List (high evidence)
PIK3R1
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
PIK3R1
Common Variable Immunodeficiency v1.12
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 36 MIM#616005
Tags
Green List (high evidence)
PLCG2
Common Variable Immunodeficiency v1.12
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Common variable immunodeficiency
  • Autoinflammation, antibody deficiency, and immune dysregulation syndrome MIM#614878
Tags
Green List (high evidence)
PLCG2
Susceptibility to Viral Infections v0.131
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hereditary susceptibility to infections, MONDO:0015979, PLCG2-related
  • Susceptibility to herpes virus
Tags
Green List (high evidence)
PLCG2
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoinflammation, antibody deficiency, and immune dysregulation syndrome MIM#614878
Tags
Green List (high evidence)
PLEKHM1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 6 MIM#611497
Tags
Green List (high evidence)
PLG
Hereditary angioedema v1.5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hereditary angioedema-4 (HAE4), MIM#619360
Tags
Green List (high evidence)
PNP
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency due to purine nucleoside phosphorylase deficiency MIM# 613179
  • Autoimmune hemolytic anaemia
  • neurological impairment
  • SCID
  • CID
  • hypouricaemia
  • failure to thrive
  • chronic diarrhoea
  • recurrent respiratory/ gastrointestinal infections
  • normal-low Ig levels
  • spastic paresis
  • tremor
  • ataxia
  • DD
Tags
Green List (high evidence)
POLA1
Autoinflammatory Disorders v2.3
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Pigmentary disorder, reticulate, with systemic manifestations, X-linked, MIM# 301220
Tags
  • deep intronic
Green List (high evidence)
POLA1
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • X-linked reticulate pigmentary disorder MONDO:0010523
Tags
Green List (high evidence)
POLA2
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Telomere biology syndrome MONDO:0100137
Tags
Green List (high evidence)
POLD1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 120, MIM# 620836
  • Low CD4 T cells
  • Low B cells, normal maturation
  • recurrent respiratory tract infections, skin infections, warts and molluscum
  • short stature
  • intellectual disability
Tags
Green List (high evidence)
POLD3
Severe Combined Immunodeficiency (absent T present B cells) v1.9
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 122, MIM# 620869
Tags
Green List (high evidence)
POLE
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • FILS syndrome, MIM# 615139
  • IMAGE-I syndrome, MIM# 618336
Tags
  • deep intronic
Green List (high evidence)
POMP
Disorders of immune dysregulation v1.5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Combined immunodeficiency
  • Autoinflammation
Tags
Green List (high evidence)
POMP
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • proteasome-associated autoinflammatory syndrome 2 MONDO:0054700
Tags
Green List (high evidence)
POT1
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hereditary neoplastic syndrome, MONDO:0015356, POT1-related
Tags
Green List (high evidence)
PRF1
Disorders of immune dysregulation v1.5
2 reviews
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
PRIM1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • primordial dwarfism-immunodeficiency-lipodystrophy syndrome MONDO:0859276
Tags
Green List (high evidence)
PRKCD
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type III, MIM# 615559
  • CVID 9
Tags
Green List (high evidence)
PRKCD
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type III MIM#615559
Tags
Green List (high evidence)
PRKCD
Common Variable Immunodeficiency v1.12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type III, MIM# 615559
  • CVID 9
Tags
Green List (high evidence)
PRKDC
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 26, with or without neurologic abnormalities MIM# 615966
  • Absent T and B cells
  • normal NK cells
  • SCID
  • recurrent respiratory infections
  • microcephaly
  • seizures
  • developmental delay
Tags
Green List (high evidence)
PSEN1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • ?Acne inversa, familial, 3 MIM#613737
Tags
Green List (high evidence)
PSENEN
Defects of intrinsic and innate immunity v1.19
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Acne inversa, familial, 2, with or without Dowling-Degos disease MIM#613736
Tags
Green List (high evidence)
PSMB10
Autoinflammatory Disorders v2.3
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 5, MIM# 619175
Tags
Green List (high evidence)
PSMB10
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Severe combined immunodeficiency, MONDO:0015974, PSMB10-related
Tags
Green List (high evidence)
PSMB8
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 1, MIM# 256040
  • MONDO:0054698
Tags
Green List (high evidence)
PSMB9
Autoinflammatory Disorders v2.3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 3, digenic, MIM# 617591
  • Proteasome-associated autoinflammatory syndrome 6, MIM# 620796
Tags
Green List (high evidence)
PSMD12
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Stankiewicz-Isidor syndrome MONDO:0054591
Tags
Green List (high evidence)
PSTPIP1
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Pyogenic sterile arthritis, pyoderma gangrenosum, and acne, MIM# 604416
  • Autoinflammatory syndrome with cytopenia, hyperzincemia, and hypercalprotectinemia, MIMM# 601979
Tags
Green List (high evidence)
PSTPIP1
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoinflammatory syndrome with cytopenia, hyperzincemia, and hypercalprotectinemia, MIMM# 601979
  • Pyogenic sterile arthritis, pyoderma gangrenosum, and acne, MIM# 604416
  • PSTPIP1-associated myeloid-related proteinemia inflammatory (PAMI) syndrome
Tags
Green List (high evidence)
PTCRA
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 126, MIM# 620931
Tags
Green List (high evidence)
PTCRA
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 126, MIM# 620931
Tags
Green List (high evidence)
PTEN
Common Variable Immunodeficiency v1.12
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Macrocephaly/autism syndrome MIM#605309
  • Cowden syndrome 1 MIM#158350
  • Skewed immune repertoire composition
Tags
Green List (high evidence)
PTEN
Predominantly Antibody Deficiency v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • PTEN hamartoma tumor syndrome MONDO:0017623
Tags
Green List (high evidence)
PTPRC
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, T cell-negative, B-cell/natural killer-cell positive MIM# 608971
  • Hepatitis C virus, susceptibility to MIM# 609532
Tags
Green List (high evidence)
PUS1
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Myopathy, lactic acidosis, and sideroblastic anemia 1, MIM# 600462
Tags
Green List (high evidence)
RAB27A
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Griscelli syndrome, type 2, MIM# 607624
Tags
Green List (high evidence)
RAC2
Combined Immunodeficiency v1.114
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 73A with defective neutrophil chemotaxix and leukocytosis MIM# 608203
  • Immunodeficiency 73C with defective neutrophil chemotaxis and hypogammaglobulinaemia MIM# 618987
  • Immunodeficiency 73B with defective neutrophil chemotaxis and lymphopaenia MIM# 618986
Tags
Green List (high evidence)
RAC2
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • SCID
  • recurrent bacterial and viral infections
  • lymphoproliferation
  • neutropaenia
  • reticular dysgenesis
  • deafness
Tags
Green List (high evidence)
RAC2
Predominantly Antibody Deficiency v1.0
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • SCID
  • recurrent bacterial and viral infections
  • lymphoproliferation
  • neutropaenia
  • reticular dysgenesis
  • deafness
  • selective IgA deficiency
  • Reduced Ab responses following vaccination
Tags
Green List (high evidence)
RAC2
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutrophil immunodeficiency syndrome, MIM# 608203
  • Common variable immunodeficiency
Tags
Green List (high evidence)
RAD50
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Nijmegen breakage syndrome-like disorder, MIM# 613078
  • Hypogammaglobulinaemia
Tags
Green List (high evidence)
RAD51C
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anemia, complementation group O, MIM# 613390
Tags
Green List (high evidence)
RAG1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Alpha/beta T-cell lymphopenia with gamma/delta T-cell expansion, severe cytomegalovirus infection, and autoimmunity MIM# 609889
  • Combined cellular and humoral immune defects with granulomas MIM# 233650
  • Omenn syndrome MIM# 603554
  • Severe combined immunodeficiency, B cell-negative MIM# 601457
Tags
Green List (high evidence)
RAG1
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
RAG1
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, B cell-negative (MIM#601457)
Tags
Green List (high evidence)
RAG2
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, B cell-negative (MIM#601457)
Tags
Green List (high evidence)
RAG2
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Omenn syndrome MIM# 603554
  • Severe combined immunodeficiency, B cell-negative MIM# 601457
  • Combined cellular and humoral immune defects with granulomas MIM# 233650
Tags
Green List (high evidence)
RAG2
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
RANBP2
Defects of intrinsic and innate immunity v1.19
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Encephalopathy, acute, infection-induced, 3, susceptibility to} MIM#608033
Tags
Green List (high evidence)
RASGRP1
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 64, MIM#618534
Tags
Green List (high evidence)
RBCK1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Polyglucosan body myopathy 1 with or without immunodeficiency MIM# 615895
  • muscular weakness
  • cardiomyopathy
  • recurrent bacterial/viral infections
  • autoinflammation
  • immunodeficiency
  • Poor antibody responses to polysaccharides
  • failure to thrive
  • fever
  • pneumonia
Tags
Green List (high evidence)
RBCK1
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Polyglucosan body myopathy 1 with or without immunodeficiency MIM# 615895
  • muscular weakness
  • cardiomyopathy
  • recurrent bacterial/viral infections
  • autoinflammation
  • immunodeficiency
  • Poor antibody responses to polysaccharides
  • failure to thrive
  • fever
  • pneumonia
Tags
Green List (high evidence)
RBM8A
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Thrombocytopenia-absent radius syndrome, MIM# 274000
Tags
  • SV/CNV
Green List (high evidence)
RECQL4
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Rothmund-Thomson syndrome MONDO:0010002
Tags
Green List (high evidence)
RELA
Inflammatory bowel disease v0.122
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Mucocutaneous ulceration, chronic, MIM# 618287
  • Inflammatory bowel disease
Tags
Green List (high evidence)
RELA
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Mucocutaneous ulceration, chronic, MIM# 618287
  • Impaired NFkB activation
  • reduced production of inflammatory cytokines
  • autoimmune cytopaenias
Tags
Green List (high evidence)
RELA
Autoinflammatory Disorders v2.3
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Mucocutaneous ulceration, chronic, MIM# 618287
  • periodic fever, inflammatory bowel disease, JIA
Tags
Green List (high evidence)
RELB
Combined Immunodeficiency v1.114
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 53, MIM# 617585
  • T cells: normal number, poor diversity, poor function
  • recurrent infections
Tags
Green List (high evidence)
RFX5
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare lymphocyte syndrome, type II, complementation group C MIM# 209920
  • Bare lymphocyte syndrome, type II, complementation group E MIM# 209920
Tags
Green List (high evidence)
RFXANK
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • MHC class II deficiency, complementation group B MIM# 209920
  • Bare Lymphocyte Syndrome, type II, complementation group B
  • Low CD4+ T cells
  • reduced MHC II expression on lymphocytes
  • Normal-low Ig levels
  • Failure to thrive
  • respiratory/gastrointestinal infections
  • liver/biliary tract disease
  • diarrhoea
  • Severe autoimmune cytopaenia
  • agammaglobulinaemia
Tags
  • founder
Green List (high evidence)
RFXAP
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare lymphocyte syndrome, type II, complementation group D MIM# 209920
  • Low CD4+ T cells
  • reduced MHC II expression on lymphocytes
  • Normal-low Ig levels
  • Failure to thrive
  • respiratory/gastrointestinal infections
  • liver/biliary tract disease
  • diarrhoea
  • Severe autoimmune cytopaenia
  • agammaglobulinaemia
Tags
Green List (high evidence)
RHBDF2
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pneumonia
  • Colitis
  • Immunodeficiency
Tags
Green List (high evidence)
RIPK1
Disorders of immune dysregulation v1.5
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 57, MIM#618108
Tags
Green List (high evidence)
RIPK1
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 57, MIM#618108
Tags
Green List (high evidence)
RIPK1
Autoinflammatory Disorders v2.3
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Literature
Phenotypes
  • autoinflammation with episodic fever and lymphadenopathy MONDO:0030018
Tags
Green List (high evidence)
RMRP
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cartilage-hair hypoplasia, MIM# 250250
Tags
Green List (high evidence)
RMRP
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Cartilage hair hypoplasia (CHH) MIM#250250
  • shortened limbs
  • short stature
  • metaphysical dysplasia
  • fine, sparse and/or light-coloured hair
  • hematologic abnormalities
  • CID
  • impaired lymphocyte proliferation
  • low Ig levels
  • antibodies variably decreased
  • bone marrow failure
  • autoimmunity
  • susceptibility to lymphoma and other cancers
  • impaired spermatogenesis
  • neuronal dysplasia of the intestine
Tags
Green List (high evidence)
RNASEH2A
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 4, MIM# 610333
Tags
Green List (high evidence)
RNASEH2A
Disorders of immune dysregulation v1.5
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
RNASEH2B
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 2, MIM# 610181
Tags
Green List (high evidence)
RNASEH2B
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
RNASEH2C
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 3, MIM# 610329
Tags
Green List (high evidence)
RNASEH2C
Disorders of immune dysregulation v1.5
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
RNF168
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • RIDDLE syndrome MIM# 611943
  • Radiosensitivity
  • Immune Deficiency
  • Dysmorphic Features
  • Learning difficulties
  • Low IgG or IgA
  • Short stature
  • mild defect of motor control to ataxia
  • normal intelligence to learning difficulties
  • mild facial dysmorphism to microcephaly
Tags
Green List (high evidence)
RNU4ATAC
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lowry-Wood syndrome MIM#226960
  • Microcephalic osteodysplastic primordial dwarfism, type I MIM#210710
  • Roifman syndrome MIM#616651
Tags
Green List (high evidence)
RNU7-1
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Aicardi-Goutieres syndrome 9 (MIM#619487)
Tags
Green List (high evidence)
RORC
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 42, MIM# 616622
Tags
Green List (high evidence)
RORC
Susceptibility to Fungal Infections v1.7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 42, MIM# 616622
  • Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency, MONDO:0014710
Tags
Green List (high evidence)
RPA1
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 6, MIM# 619767
  • Bone marrow failure
  • T- and B-cell lymphopaenia
  • pulmonary fibrosis
  • skin manifestations
  • short telomeres
Tags
Green List (high evidence)
RPL11
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 7, MIM# 612562
  • MONDO:0012938
Tags
Green List (high evidence)
RPL15
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Diamond-Blackfan anemia 12, MIM# 615550
Tags
Green List (high evidence)
RPL26
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Diamond-Blackfan anemia 11, MIM# 614900
Tags
Green List (high evidence)
RPL35A
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 5, MIM# 612528
  • MONDO:0012925
Tags
  • SV/CNV
Green List (high evidence)
RPL5
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anaemia 6, MIM# 612561
  • MONDO:0012937
Tags
Green List (high evidence)
RPS10
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anaemia 9, MIM# 613308
Tags
Green List (high evidence)
RPS17
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Diamond-Blackfan anaemia 4, MIM# 612527
  • MONDO:0012924
Tags
Green List (high evidence)
RPS19
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 1, MIM# 105650
  • MONDO:0007110
Tags
Green List (high evidence)
RPS24
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-blackfan anemia 3, MIM# 610629
  • MONDO:0012529
Tags
Green List (high evidence)
RPS26
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 10, MIM# 613309
  • MONDO:0013217
Tags
Green List (high evidence)
RPS7
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 8, MIM# 612563
  • MONDO:0012939
Tags
Green List (high evidence)
RPSA
Defects of intrinsic and innate immunity v1.19
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Asplenia, isolated congenital, MIM# 271400
Tags
Green List (high evidence)
RTEL1
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
RTEL1
Bone Marrow Failure v1.112
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, MIM# 615190
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3, MIM# 616373
Tags
Green List (high evidence)
RTEL1
Combined Immunodeficiency v1.114
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal dominant 4 MIM# 615190
  • Dyskeratosis congenita, autosomal recessive 5 MIM# 615190
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 MIM# 616373
Tags
Green List (high evidence)
RUNX1
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Platelet disorder, familial, with associated myeloid malignancy, MIM# 601399
Tags
Green List (high evidence)
SAMD9
Inflammatory bowel disease v0.122
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • MIRAGE syndrome, MIM# 617053
Tags
Green List (high evidence)
SAMD9
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • MIRAGE syndrome, MIM#617053
Tags
Green List (high evidence)
SAMD9L
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Ataxia-pancytopenia syndrome, MIM# 159550
Tags
Green List (high evidence)
SAMHD1
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 5, MIM# 612952
Tags
Green List (high evidence)
SAMHD1
Disorders of immune dysregulation v1.5
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
SASH3
Disorders of immune dysregulation v1.5
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 102, MIM# 301082
Tags
Green List (high evidence)
SASH3
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 102, MIM# 301082
Tags
Green List (high evidence)
SAT1
Autoinflammatory Disorders v2.3
2 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Systemic lupus erythematosus, MONDO:0007915, SAT1-related
Tags
Green List (high evidence)
SBDS
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Shwachman-Diamond syndrome, MIM# 260400
Tags
Green List (high evidence)
SBDS
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Shwachman-Diamond syndrome, MIM# 260400
Tags
Green List (high evidence)
SEC23B
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyserythropoietic anemia, congenital, type II , MIM#224100
Tags
Green List (high evidence)
SEC61A1
Common Variable Immunodeficiency v1.12
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 15, MIM# 620670
Tags
Green List (high evidence)
SEC61A1
Predominantly Antibody Deficiency v1.0
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • Hyperuricemic nephropathy, familial juvenile, 4, MIM# 617056
  • Immunodeficiency, common variable, 15, MIM# 620670
Tags
Green List (high evidence)
SEC61A1
Phagocyte Defects v1.33
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Phenotypes
  • Hyperuricemic nephropathy, familial juvenile, 4, MIM# 617056
  • Neutropenia, severe congenital, 11, autosomal dominant, MIM# 620674
  • Immunodeficiency, common variable, 15, MIM# 620670
Tags
Green List (high evidence)
SENP7
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Literature
Phenotypes
  • Arthrogryposis multiplex congenita, MONDO:0015168, SENP7-related
Tags
Green List (high evidence)
SENP7
Phagocyte Defects v1.33
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Arthrogryposis multiplex congenita, MONDO:0015168, SENP7-related
Tags
Green List (high evidence)
SERPINA1
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Emphysema-cirrhosis, due to AAT deficiency, MIM# 613490
Tags
Green List (high evidence)
SERPING1
Hereditary angioedema v1.5
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Angioedema, hereditary, 1 and 2, MIM# 106100
Tags
Green List (high evidence)
SERPING1
Complement Deficiencies v0.74
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
SGPL1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Expert Review
Phenotypes
  • Sphingosine Phosphate Lyase Insufficiency Syndrome
  • RENI syndrome (MIM#617575)
Tags
Green List (high evidence)
SH2B3
Bone Marrow Failure v1.112
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Predisposition to haematological malignancies
  • Myeloproliferation and multi-organ autoimmunity
  • juvenile myelomonocytic leukemia MONDO:001190, SH2B3-related
Tags
Green List (high evidence)
SH2B3
Disorders of immune dysregulation v1.5
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Predisposition to haematological malignancies
  • Myeloproliferation and multi-organ autoimmunity
  • juvenile myelomonocytic leukemia MONDO:001190, SH2B3-related
Tags
Green List (high evidence)
SH2D1A
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
SH2D1A
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
SH2D1A
Susceptibility to Viral Infections v0.131
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Host response to EBV infection
  • Lymphoproliferative syndrome, X-linked, 1 308240
Tags
Green List (high evidence)
SH2D1A
Disorders of immune dysregulation v1.5
2 reviews
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
SH3BP2
Autoinflammatory Disorders v2.3
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Cherubism, MIM# 118400
Tags
Green List (high evidence)
SHARPIN
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammation with episodic fever and immune dysregulation, MIM# 620795
Tags
Green List (high evidence)
SKIV2L
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Trichohepatoenteric syndrome 2, MIM#614602
Tags
Green List (high evidence)
SKIV2L
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
SKIV2L
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Trichohepatoenteric syndrome 2, MIM# 614602
  • Respiratory infections
  • IUGR
  • Facial dysmorphic features
  • Wooly hair
  • Early-onset intractable diarrhoea
  • Liver cirrhosis
  • Platelet abnormalities
Tags
Green List (high evidence)
SLC19A2
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Thiamine-responsive megaloblastic anemia syndrome, MIM# 249270
Tags
Green List (high evidence)
SLC25A38
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Anemia, sideroblastic, 2, pyridoxine-refractory, MIM# 205950
Tags
Green List (high evidence)
SLC29A3
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Histiocytosis-lymphadenopathy plus syndrome, MIM# 602782
Tags
Green List (high evidence)
SLC35C1
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Congenital disorder of glycosylation, type IIc, MIM# 266265, MONDO:0009953
Tags
Green List (high evidence)
SLC37A4
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
SLC37A4
Bone Marrow Failure v1.112
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Literature
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Glycogen storage disease Ib, MIM# 232220
Tags
Green List (high evidence)
SLC37A4
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Glycogen storage disease Ib, MIM# 232220
Tags
Green List (high evidence)
SLC39A7
Predominantly Antibody Deficiency v1.0
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Agammaglobulinaemia 9, autosomal recessive, MIM# 619693
  • Antibody deficiency
  • early onset infections
  • blistering dermatosis
  • failure to thrive
  • thrombocytopaenia
Tags
Green List (high evidence)
SLC46A1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Folate malabsorption, hereditary MIM# 229050
  • Decreased Ig levels
  • megaloblastic anaemia
  • failure to thrive
  • Immunodeficiency
  • if untreated for prolonged periods results in intellectual disability
  • oral mucositis
  • hypoimmunoglobulinaemia
  • recurrent infections
  • seizures
  • motor impairment
  • leukopaenia
  • thrombocytopaenia
Tags
  • founder
Green List (high evidence)
SLC7A7
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lysinuric protein intolerance, MIM# 222700
  • Hyper-inflammatory response of macrophages
  • Normal NK cell function
  • Lysinuric protein intolerance
  • Bleeding tendency
  • Alverolar proteinosis
Tags
Green List (high evidence)
SLCO2A1
Inflammatory bowel disease v0.122
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inflammatory bowel disease, MONDO:0005265, SLCO2A1-related
  • Enteropathy
Tags
Green List (high evidence)
SLX4
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anemia, complementation group P, MIM# 613951
Tags
Green List (high evidence)
SMARCAL1
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Schimke immunoosseous dysplasia, MIM# 242900
Tags
Green List (high evidence)
SMARCAL1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Schimke immune-osseous dysplasia MIM# 242900
  • T cell deficiency
  • Short stature
  • spondyloepiphyseal dysplasia
  • renal dysfunction
  • lymphocytopaenia
  • nephropathy
  • bacterial/viral/fungal infections
  • may present as SCID
  • bone marrow failure
Tags
Green List (high evidence)
SMARCD2
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Specific granule deficiency 2, MIM# 617475
  • Neutropaenia
  • Neurodevelopmental abnormalities in some
  • Myelodysplasia
Tags
Green List (high evidence)
SNORA31
Susceptibility to Viral Infections v0.131
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 1}, MIM# 619396
Tags
Green List (high evidence)
SNORA31
Defects of intrinsic and innate immunity v1.19
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • encephalitis, acute, infection-induced, susceptibility to MONDO:0800174
Tags
Green List (high evidence)
SNX10
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 8 MIM#615085
Tags
Green List (high evidence)
SOCS1
Common Variable Immunodeficiency v1.12
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, familial, with or without immunodeficiency, MIM# 619375
  • Common variable immunodeficiency
Tags
Green List (high evidence)
SOCS1
Disorders of immune dysregulation v1.5
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, familial, with or without immunodeficiency, MIM# 619375
  • Early-onset autoimmunity
Tags
Green List (high evidence)
SOCS1
Inflammatory bowel disease v0.122
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, familial, with or without immunodeficiency, MIM# 619375
  • Enteropathy
Tags
Green List (high evidence)
SP110
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hepatic veno-occlusive disease with immunodeficiency MIM#235550
  • Hepatic veno-occlusive disease
  • susceptibility to Pneumocystis jirovecii pneumonia
  • cytomegalovirus
  • thrombocytopaenia
  • hepatosplenomegaly
  • cerebrospinal leukodystrophy
  • memory T/B cell deficiency
  • low Ig levels
  • absent tissue plasma cells
  • absent lymph node germinal centers
  • hypogammaglobulinaemia
Tags
  • founder
Green List (high evidence)
SP110
Predominantly Antibody Deficiency v1.0
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
SPI1
Predominantly Antibody Deficiency v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Agammaglobulinaemia 10, autosomal dominant, MIM# 619707
Tags
Green List (high evidence)
SPINK5
Combined Immunodeficiency v1.114
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Netherton syndrome MIM# 256500
  • Low switched and non-switched B cells
  • High IgE and IgA
  • Antibody variably decreased
  • Congenital ichthyosis
  • bamboo hair
  • atopic diathesis
  • increased bacterial infections
  • failure to thrive
  • food allergies
Tags
Green List (high evidence)
SRP54
Phagocyte Defects v1.33
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Neutropenia, severe congenital, 8, autosomal dominant, MIM# 618752
Tags
Green List (high evidence)
SRP54
Bone Marrow Failure v1.112
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Syndromic neutropenia with Shwachman-Diamond-like features
Tags
Green List (high evidence)
STAT1
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
STAT1
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
STAT1
Susceptibility to Fungal Infections v1.7
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 31C, autosomal dominant, MIM# 614162
  • Predisposition to Mucocutaneous Candidiasis
Tags
Green List (high evidence)
STAT1
Susceptibility to Viral Infections v0.131
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 31B, mycobacterial and viral infections, autosomal recessive, MIM# 613796
Tags
Green List (high evidence)
STAT2
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory disorder
Tags
Green List (high evidence)
STAT2
Susceptibility to Viral Infections v0.131
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
STAT2
Defects of intrinsic and innate immunity v1.19
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
STAT3
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 1 MIM#615952
  • STAT3-related early-onset multisystem autoimmune disease MONDO:0014414
Tags
Green List (high evidence)
STAT3
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
STAT3
Susceptibility to Fungal Infections v1.7
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hyper-IgE recurrent infection syndrome , MIM#147060
  • Mucocutaneous candidiasis
Tags
Green List (high evidence)
STAT3
Disorders of immune dysregulation v1.5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 1 MIM# 615952
  • Lymphoproliferation
  • solid organ autoimmunity
  • recurrent infections
  • short stature
  • eczema
  • delayed puberty
  • dental abnormalities
  • autoimmune interstitial lung disease
  • juvenile-onset arthritis
  • primary hypothyroidism
Tags
Green List (high evidence)
STAT3
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hyper-IgE recurrent infection syndrome MIM# 147060
  • Autoimmune disease, multisystem, infantile-onset, 1 MIM# 615952
Tags
Green List (high evidence)
STAT4
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Disabling pansclerotic morphea of childhood MIM#620443
Tags
Green List (high evidence)
STAT5B
Combined Immunodeficiency v1.114
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Growth hormone insensitivity with immunodeficiency, MIM# 245590
Tags
  • somatic
Green List (high evidence)
STAT6
Disorders of immune dysregulation v1.5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hyper-IgE syndrome 6, autosomal dominant, with atopy and allergies, MIM# 620532
Tags
Green List (high evidence)
STAT6
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • hyper-IgE syndrome MONDO:0018037
Tags
Green List (high evidence)
STIM1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 10, MIM# 612783
Tags
Green List (high evidence)
STK4
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • T-cell immunodeficiency, recurrent infections, autoimmunity, and cardiac malformations MIM# 614868
  • CD4/CD8 lymphopaenia
  • cardiac malformations
  • reduced naïve T cells
  • increased TEM and TEMRA cells
  • poor T cell Proliferation
  • Reduced memory B cells
  • Reduced IgM, increased IgG, IgA, IgE
  • impaired antibody responses
  • intermittent neutropaenia
  • bacterial/ viral/ fungal infections
  • autoimmune cytopaenias
  • mucocutaneous candidiasis
  • cutaneous warts
Tags
Green List (high evidence)
STN1
Bone Marrow Failure v1.112
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Cerebroretinal microangiopathy with calcification and cysts 2, MIM#617341
Tags
Green List (high evidence)
STX11
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemophagocytic lymphohistiocytosis, familial, 4 , MIM#603552
Tags
Green List (high evidence)
STXBP2
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
STXBP2
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
STXBP3
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Very Early Onset Inflammatory Bowel Disease
  • Bilateral Sensorineural Hearing Loss
  • Immune Dysregulation
Tags
Green List (high evidence)
STXBP3
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Very Early Onset Inflammatory Bowel Disease
  • Bilateral Sensorineural Hearing Loss
  • Immune Dysregulation
Tags
Green List (high evidence)
SYK
Disorders of immune dysregulation v1.5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency-82 with systemic inflammation (IMD82) , MIM#619381
Tags
Green List (high evidence)
SYK
Autoinflammatory Disorders v2.3
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Literature
Phenotypes
  • immunodeficiency 82 with systemic inflammation MONDO:0030308
Tags
Green List (high evidence)
TAP1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare lymphocyte syndrome, type I MIM#604571
  • Low CD8
  • absent MHC I on lymphocytes
  • vasculitis
  • pyoderma gangrenosum
  • skin lesions
  • recurrent respiratory tract infections
  • bronchiectasis
Tags
Green List (high evidence)
TAP2
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • MHC class I deficiency 2, MIM# 620813
  • Bare lymphocyte syndrome, type I, due to TAP2 deficiency MIM# 604571
  • Low CD8
  • absent MHC I on lymphocytes
  • Vasculitis
  • pyoderma gangrenosum
  • recurrent bacterial/viral respiratory infections
  • bronchiectasis
Tags
Green List (high evidence)
TAZ
Phagocyte Defects v1.33
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Barth syndrome, MIM# 302060
Tags
Green List (high evidence)
TAZ
Bone Marrow Failure v1.112
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Barth syndrome, MIM# 302060
Tags
Green List (high evidence)
TBCE
Combined Immunodeficiency v1.114
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypoparathyroidism-retardation-dysmorphism syndrome, MIM# 241410
Tags
Green List (high evidence)
TBK1
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TBK1
Autoinflammatory Disorders v2.3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammation with arthritis and vasculitis, MIM# 620880
Tags
Green List (high evidence)
TBK1
Susceptibility to Viral Infections v0.131
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hereditary predisposition to infections, MONDO:0015979, TBK1-related
Tags
Green List (high evidence)
TBX1
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • DiGeorge syndrome MIM# 188400
  • Velocardiofacial syndrome MIM# 192430
  • Decreased T cells
  • Hypoparathyroidism
  • Conotruncal cardiac malformation
  • velopalatal insufficiency
  • abnormal facies (cleft palate, prominent tubular nose etc)
  • intellectual disability
  • Immunodeficiency
  • thymic hypoplasia or aplasia with resultant T‐cell dysfunction
  • renal anomalies
  • autoimmunity
Tags
  • SV/CNV
Green List (high evidence)
TBXAS1
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Ghosal hematodiaphyseal syndrome, MIM#231095
Tags
Green List (high evidence)
TCF3
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 8, autosomal dominant, MIM# 616941
  • Agammaglobulinaemia 8B, autosomal recessive, MIM# 619824
Tags
Green List (high evidence)
TCF3
Common Variable Immunodeficiency v1.12
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 8, autosomal dominant, MIM# 616941
  • Agammaglobulinaemia 8B, autosomal recessive, MIM# 619824
Tags
Green List (high evidence)
TCIRG1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 1 MIM#259700
Tags
Green List (high evidence)
TCN2
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Transcobalamin II deficiency MIM# 275350
  • Decreased Ig levels
  • Megaloblastic anaemia
  • pancytopaenia
  • if untreated (B12) for prolonged periods results in intellectual disability
  • failure to thrive
  • diarrhoea
  • hypogammaglobulinaemia
  • pallor
  • hypotonia
  • respiratory infection
Tags
Green List (high evidence)
TCN2
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Transcobalamin II deficiency, MIM#275350
Tags
Green List (high evidence)
TERC
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal dominant 1, MIM# 127550
Tags
Green List (high evidence)
TERT
Bone Marrow Failure v1.112
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, MIM# 613989
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1, MIM# 614742
Tags
Green List (high evidence)
TET2
Disorders of immune dysregulation v1.5
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immune dysregulation
  • Lymphoma
  • Immunodeficiency-75 (IMD75), MIM#619126
Tags
Green List (high evidence)
TGFBR1
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TGFBR1
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Loeys-Dietz syndrome 1 MIM#609192
Tags
Green List (high evidence)
TGFBR2
Combined Immunodeficiency v1.114
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Loeys-Dietz syndrome 2 MIM#610168
Tags
Green List (high evidence)
TGFBR2
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
THPO
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Amegakaryocytic thrombocytopenia, congenital, 2, MIM# 620481
Tags
Green List (high evidence)
TICAM1
Susceptibility to Viral Infections v0.131
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 6}, MIM# 614850
Tags
Green List (high evidence)
TICAM1
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TINF2
Bone Marrow Failure v1.112
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal dominant 3, MIM# 613990
  • Revesz syndrome, MIM# 268130
Tags
Green List (high evidence)
TLR3
Susceptibility to Viral Infections v0.131
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Immunodeficiency 83, susceptibility to viral infections}, MIM# 613002
Tags
Green List (high evidence)
TLR3
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TLR7
Disorders of immune dysregulation v1.5
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Systemic lupus erythematosus 17, MIM# 301080
Tags
Green List (high evidence)
TLR7
Susceptibility to Viral Infections v0.131
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 74, COVID19-related, X-linked, MIM# 301051
Tags
Green List (high evidence)
TLR7
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 74, COVID-19-related, X-linked MONDO:0026767
Tags
Green List (high evidence)
TLR8
Autoinflammatory Disorders v2.3
2 reviews
1 green 1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome MONDO:0019751, TLR8-associated
Tags
Green List (high evidence)
TLR8
Bone Marrow Failure v1.112
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 98 with autoinflammation, X-linked, MIM# 301078
Tags
  • somatic
Green List (high evidence)
TLR8
Combined Immunodeficiency v1.114
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 98 with autoinflammation, X-linked, MIM# 301078
Tags
  • somatic
Green List (high evidence)
TLR8
Defects of intrinsic and innate immunity v1.19
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 98 with autoinflammation, X-linked, MIM# 301078
Tags
Green List (high evidence)
TMC6
Defects of intrinsic and innate immunity v1.19
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TMC6
Susceptibility to Viral Infections v0.131
1 review
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TMC8
Susceptibility to Viral Infections v0.131
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TMC8
Defects of intrinsic and innate immunity v1.19
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Epidermodysplasia verruciformis 2, MIM# 618231
Tags
Green List (high evidence)
TMEFF1
Susceptibility to Viral Infections v0.131
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hereditary susceptibility to infections, MONDO:0015979, TMEFF1-related
  • HSV encephalitis
Tags
Green List (high evidence)
TMEM173
Disorders of immune dysregulation v1.5
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TMEM173
Autoinflammatory Disorders v2.3
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • STING-associated vasculopathy, infantile-onset, MIM# 615934
Tags
Green List (high evidence)
TNFAIP3
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoinflammatory syndrome, familial, Behcet-like, MIM# 616744
Tags
Green List (high evidence)
TNFAIP3
Inflammatory bowel disease v0.122
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inflammatory bowel disease
  • Crohn's disease
  • Autoinflammatory syndrome, familial, Behcet-like
Tags
Green List (high evidence)
TNFRSF11A
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 7 MIM#612301
Tags
Green List (high evidence)
TNFRSF13B
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
Other
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 2, MIM# 240500
Tags
Green List (high evidence)
TNFRSF13B
Common Variable Immunodeficiency v1.12
2 reviews
1 green
Other
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 2, MIM# 240500
Tags
Green List (high evidence)
TNFRSF1A
Autoinflammatory Disorders v2.3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Periodic fever, familial, MIM# 142680
Tags
Green List (high evidence)
TNFRSF9
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 109 with lymphoproliferation, MIM# 620282
  • EBV lymphoproliferation
  • B-cell lymphoma
  • Chronic active EBV infection
Tags
Green List (high evidence)
TNFRSF9
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 109 with lymphoproliferation, MIM# 620282
Tags
Green List (high evidence)
TNFSF11
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 2 MIM#259710
Tags
Green List (high evidence)
TOP2B
Predominantly Antibody Deficiency v1.0
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • B-cell immunodeficiency, distal limb anomalies, and urogenital malformations, MIM# 609296
  • Antibody deficiency
  • Recurrent infections
  • Facial dysmorphism
  • Limb anomalies
Tags
Green List (high evidence)
TP63
Severe Combined Immunodeficiency (absent T present B cells) v1.9
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ectrodactyly, ectodermal dysplasia, and cleft lip/palate syndrome 3, MIM# 604292
  • lymphopaenia
Tags
Green List (high evidence)
TPP2
Disorders of immune dysregulation v1.5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 78 with autoimmunity and developmental delay, MIM# 619220
Tags
Green List (high evidence)
TRAF3
Disorders of immune dysregulation v1.5
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, TRAF3-related, MONDO:0019751
  • hypergammaglobulinemia
  • lymphadenopathy
  • splenomegaly, Sjögren’s syndrome
Tags
Green List (high evidence)
TREX1
Autoinflammatory Disorders v2.3
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Systemic lupus erythematosus, susceptibility to} 152700
  • Aicardi-Goutieres syndrome 1, dominant and recessive 225750
Tags
Green List (high evidence)
TREX1
Disorders of immune dysregulation v1.5
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TRIM22
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Inflammatory bowel disease
Tags
Green List (high evidence)
TRNT1
Common Variable Immunodeficiency v1.12
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Sideroblastic anemia with B-cell immunodeficiency, periodic fevers, and developmental delay MIM#616084
Tags
Green List (high evidence)
TRNT1
Predominantly Antibody Deficiency v1.0
2 reviews
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TRNT1
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Sideroblastic anaemia with B-cell immunodeficiency, periodic fevers, and developmental delay, MIM# 616084
Tags
Green List (high evidence)
TTC37
Predominantly Antibody Deficiency v1.0
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
TTC37
Inflammatory bowel disease v0.122
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Trichohepatoenteric syndrome 1, MIM#222470
  • Colitis
  • Pancolitis
  • Inflammatory bowel disease-like phenotype
  • Very Early Onset Inflammatory Bowel Disease
Tags
Green List (high evidence)
TTC37
Common Variable Immunodeficiency v1.12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Trichohepatoenteric syndrome 1, MIM# 222470
  • Respiratory infections
  • IUGR
  • Facial dysmorphic features
  • Wooly hair:Early-onset intractable diarrhoea
  • Liver cirrhosis
  • Platelet abnormalities
Tags
Green List (high evidence)
TTC37
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Trichohepatoenteric syndrome 1, MIM# 222470
  • Respiratory infections
  • IUGR
  • Facial dysmorphic features
  • Wooly hair:Early-onset intractable diarrhoea
  • Liver cirrhosis
  • Platelet abnormalities
Tags
Green List (high evidence)
TTC7A
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Gastrointestinal defects and immunodeficiency syndrome, 243150
Tags
Green List (high evidence)
TTC7A
Inflammatory bowel disease v0.122
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Gastrointestinal defects and immunodeficiency syndrome, 243150
  • Very Early Onset Inflammatory Bowel Disease (VEOIBD)
Tags
Green List (high evidence)
TYK2
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 35, MIM# 611521
Tags
Green List (high evidence)
UBA1
Autoinflammatory Disorders v2.3
1 review
1 green
Other
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory disease, adult onset
  • VEXAS syndrome (vacuoles, E1 enzyme, X-linked, autoinflammatory, somatic), MIM#301054
Tags
  • somatic
Green List (high evidence)
UBE2T
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Fanconi anemia, complementation group T, MIM# 616435
Tags
  • SV/CNV
Green List (high evidence)
UNC13D
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemophagocytic lymphohistiocytosis, familial, 3 MIM#608898
Tags
  • treatable
Green List (high evidence)
UNC93B1
Disorders of immune dysregulation v1.5
3 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, MONDO:0019751, UNC93B1-related
Tags
Green List (high evidence)
UNG
Predominantly Antibody Deficiency v1.0
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
USB1
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Poikiloderma with neutropaenia, MIM# 604173
  • MONDO:0011405
Tags
Green List (high evidence)
USB1
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Poikiloderma with neutropaenia, MIM# 604173
  • MONDO:0011405
Tags
Green List (high evidence)
USP18
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Pseudo-TORCH syndrome 2, MIM# 617397
Tags
Green List (high evidence)
VPS13B
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Cohen syndrome, MIM# 216550
Tags
Green List (high evidence)
VPS45
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, 5, autosomal recessive, MIM# 615285
Tags
  • treatable
Green List (high evidence)
VPS45
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Neutropenia, severe congenital, 5, autosomal recessive, MIM#615285
Tags
  • treatable
Green List (high evidence)
WAS
Combined Immunodeficiency v1.114
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, X-linked MIM# 300299
  • Wiskott-Aldrich syndrome MIM# 301000
  • Thrombocytopaenia, X-linked MIM# 313900
Tags
Green List (high evidence)
WAS
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
  • Victorian Clinical Genetics Services
Tags
Green List (high evidence)
WAS
Inflammatory bowel disease v0.122
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green List (high evidence)
WAS
Phagocyte Defects v1.33
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, X-linked, MIM# 300299
Tags
Green List (high evidence)
WAS
Bone Marrow Failure v1.112
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
  • Victorian Clinical Genetics Services
Phenotypes
  • Wiskott-Aldrich syndrome, MIM# 301000
  • Thrombocytopenia, X-linked, MIM# 313900
Tags
Green List (high evidence)
WDR1
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Periodic fever, immunodeficiency, and thrombocytopenia syndrome, MIM#150550
Tags
Green List (high evidence)
WDR1
Phagocyte Defects v1.33
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Periodic fever, immunodeficiency, and thrombocytopenia syndrome, MIM#150550
  • Neutropaenia
  • Poor wound healing
  • Severe stomatitis
  • Neutrophil nuclei herniate
  • Autoinflammatory periodic fever
  • Thrombocytopaenia
Tags
Green List (high evidence)
WIPF1
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Wiskott-Aldrich syndrome 2 MIM# 614493
  • Reduced T cells
  • defective lymphocyte responses to anti-CD3
  • high IgE
  • Thrombocytopenia with or without small platelets
  • recurrent bacterial and viral Infections
  • eczema
  • bloody diarrhoea
  • gastrointestinal bleeding
  • WAS protein absent
Tags
Green List (high evidence)
WIPF1
Predominantly Antibody Deficiency v1.0
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Wiskott-Aldrich syndrome 2 MIM# 614493
  • Reduced T cells
  • defective lymphocyte responses to anti-CD3
  • high IgE
  • Thrombocytopenia with or without small platelets
  • recurrent bacterial and viral Infections
  • eczema
  • bloody diarrhoea
  • gastrointestinal bleeding
  • WAS protein absent
Tags
Green List (high evidence)
WIPF1
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Wiskott-Aldrich syndrome 2, MIM# 614493
Tags
Green List (high evidence)
WRAP53
Bone Marrow Failure v1.112
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 3, MIM# 613988
Tags
Green List (high evidence)
XIAP
Inflammatory bowel disease v0.122
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • X-linked lymphoproliferative syndrome 2
  • inflammatory bowel disease
  • colitis
Tags
Green List (high evidence)
XIAP
Predominantly Antibody Deficiency v1.0
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome, X-linked, 2, MIM# 300635
Tags
Green List (high evidence)
XIAP
Disorders of immune dysregulation v1.5
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome, X-linked, 2, MIM# 300635
Tags
  • treatable
Green List (high evidence)
XIAP
Susceptibility to Viral Infections v0.131
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome, X-linked, 2 300635
  • Host response to EBV
Tags
Green List (high evidence)
ZAP70
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 48, MIM# 269840
  • Autoimmune disease, multisystem, infantile-onset, 2, MIM# 617006
Tags
Green List (high evidence)
ZAP70
Disorders of immune dysregulation v1.5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 2 MIM#617006
Tags
Green List (high evidence)
ZBTB24
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency-centromeric instability-facial anomalies syndrome 2 MIM# 614069
  • Facial dysmorphic features
  • developmental delay
  • macroglossia
  • bacterial/opportunistic infections
  • malabsorption
  • cytopaenia
  • malignancies
  • multiradial configurations of chromosomes 1, 9, 16
  • Hypogammaglobulinaemia or agammaglobulinaemia
  • variable antibody deficiency
Tags
Green List (high evidence)
ZCCHC8
Bone Marrow Failure v1.112
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related MONDO:0000148
Tags
Green List (high evidence)
ZNF341
Combined Immunodeficiency v1.114
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hyper-IgE recurrent infection syndrome 3, autosomal recessive, MIM# 618282
  • Mild facial dysmorphism
  • Early onset eczema
  • Recurrent bacterial skin infections, abscesses
  • Recurrent respiratory infections, lung abscesses and pneumothoraces
  • Hyperextensible joints, bone fractures, retention of primary teeth
Tags
Green List (high evidence)
ZNFX1
Autoinflammatory Disorders v2.3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 91 and hyperinflammation, MIM# 619644
Tags
Green List (high evidence)
ZNFX1
Susceptibility to Viral Infections v0.131
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 91 and hyperinflammation, MIM# 619644
Tags
Green List (high evidence)
ZNFX1
Defects of intrinsic and innate immunity v1.19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Expert Review Green
  • Literature
Phenotypes
  • immunodeficiency 91 and hyperinflammation MONDO:0030491
Tags
Amber List (moderate evidence)
ACTB
Phagocyte Defects v1.33
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Baraitser-Winter syndrome 1, MIM# 243310
Tags
Amber List (moderate evidence)
ALPI
Inflammatory bowel disease v0.122
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Inflammatory bowel disease, MONDO:0005265, ALPI-related
Tags
Amber List (moderate evidence)
ANGPT1
Hereditary angioedema v1.5
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Other
Phenotypes
  • Hereditary angioedema-5 (HAE5), MIM#619361
Tags
Amber List (moderate evidence)
AP1S3
Autoinflammatory Disorders v2.3
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Psoriasis 15, pustular, susceptibility to} 616106
Tags
Amber List (moderate evidence)
ARHGEF1
Common Variable Immunodeficiency v1.12
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Tags
Amber List (moderate evidence)
ARHGEF1
Predominantly Antibody Deficiency v1.0
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
  • Literature
Phenotypes
  • Immunodeficiency 62, MIM#618459
Tags
Amber List (moderate evidence)
BLK
Common Variable Immunodeficiency v1.12
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • common variable immunodeficiency
Tags
Amber List (moderate evidence)
C17orf62
Inflammatory bowel disease v0.122
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • Chronic granulomatous disease
Tags
Amber List (moderate evidence)
C4A
Complement Deficiencies v0.74
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C4a deficiency MIM#614380
  • susceptibility systemic lupus erythematosus
Tags
  • for review
  • SV/CNV
Amber List (moderate evidence)
C4B
Complement Deficiencies v0.74
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • susceptibility to autoimmune disease
  • C4B deficiency MIM#614379
Tags
  • SV/CNV
Amber List (moderate evidence)
C8A
Complement Deficiencies v0.74
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C8 deficiency, type I MIM#613790
Tags
Amber List (moderate evidence)
CARD8
Inflammatory bowel disease v0.122
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Inflammatory bowel disease-30, MIM#619079
Tags
Amber List (moderate evidence)
CASP8
Disorders of immune dysregulation v1.5
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type IIB MIM#607271
Tags
Amber List (moderate evidence)
CASP8
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type IIB MIM#607271
Tags
Amber List (moderate evidence)
CD274
Disorders of immune dysregulation v1.5
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immune dysregulation, autoimmunity and auto inflammation, MONDO:0957790
Tags
Amber List (moderate evidence)
CD28
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency-123 with HPV-related verrucosis (IMD123), MIM#620901
Tags
Amber List (moderate evidence)
CD28
Susceptibility to Viral Infections v0.131
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency-123 with HPV-related verrucosis (IMD123), MIM#620901
  • isolated susceptibility to cutaneous α- and γ-HPVs
Tags
Amber List (moderate evidence)
CD8A
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • CD8 deficiency, familial, MIM# 608957
Tags
Amber List (moderate evidence)
CEBPE
Autoinflammatory Disorders v2.3
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 108 with autoinflammation , MIM# 260570
Tags
Amber List (moderate evidence)
CFB
Complement Deficiencies v0.74
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Complement factor B deficiency, MIM# 615561
Tags
Amber List (moderate evidence)
COPG1
Combined Immunodeficiency v1.114
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 128, MIM# 620983
Tags
Amber List (moderate evidence)
CTNNBL1
Common Variable Immunodeficiency v1.12
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias, MIM# 619846
Tags
Amber List (moderate evidence)
CTNNBL1
Predominantly Antibody Deficiency v1.0
3 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
  • Expert Review Amber
  • Literature
  • Expert Review Amber
  • Literature
Phenotypes
  • common variable immunodeficiency MONDO:0015517
Tags
Amber List (moderate evidence)
CXCR4
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • WHIM syndrome, MIM# 193670
Tags
Amber List (moderate evidence)
DOCK2
Disorders of immune dysregulation v1.5
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Genetic hemophagocytic lymphohistiocytosis MONDO:0015541
Tags
Amber List (moderate evidence)
EPCAM
Inflammatory bowel disease v0.122
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Diarrhea 5, with tufting enteropathy, congenital, MIM# 613217
Tags
Amber List (moderate evidence)
ERBIN
Combined Immunodeficiency v1.114
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, ERBIN-related
  • Recurrent respiratory infections
  • Susceptibility to S.aureus
  • Eczema
  • Hyperextensible joints
  • Scoliosis
  • Arterial dilatation in some
Tags
Amber List (moderate evidence)
FCGR3A
Defects of intrinsic and innate immunity v1.19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 20, MIM# 615707
Tags
Amber List (moderate evidence)
FCGR3A
Susceptibility to Viral Infections v0.131
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 20, MIM# 615707
Tags
Amber List (moderate evidence)
FCN3
Complement Deficiencies v0.74
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency due to ficolin 3 deficiency, MIM# 613860
Tags
Amber List (moderate evidence)
FGL2
Disorders of immune dysregulation v1.5
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoinflammatory syndrome, MONDO:0019751, FGL2-related
Tags
Amber List (moderate evidence)
FLT3LG
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • ?Immunodeficiency 125 MIM#620926
Tags
Amber List (moderate evidence)
FLT3LG
Bone Marrow Failure v1.112
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 125, MIM# 620926
Tags
Amber List (moderate evidence)
FOXI3
Combined Immunodeficiency v1.114
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • thymic dysplasia MONDO:0004195
Tags
Amber List (moderate evidence)
GATA3
Disorders of immune dysregulation v1.5
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immune dysregulation
  • Hypoparathyroidism, sensorineural deafness, and renal dysplasia MIM#146255
Tags
Amber List (moderate evidence)
GUK1
Combined Immunodeficiency v1.114
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Mitochondrial DNA depletion syndrome 21, MIM# 621071
Tags
Amber List (moderate evidence)
HCK
Autoinflammatory Disorders v2.3
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoinflammation with pulmonary and cutaneous vasculitis, MIM#620296
Tags
Amber List (moderate evidence)
HOXA11
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Radioulnar synostosis with amegakaryocytic thrombocytopenia 1, MIM# 605432
Tags
Amber List (moderate evidence)
HSPA1L
Inflammatory bowel disease v0.122
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • inflammatory bowel disease, MONDO:0005265, HSPA1L-related
Tags
Amber List (moderate evidence)
ICOSLG
Common Variable Immunodeficiency v1.12
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Combined immunodeficiency
  • recurrent bacterial and viral infections
  • neutropaenia
Tags
Amber List (moderate evidence)
ICOSLG
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 119, MIM# 620825
  • Combined immunodeficiency
  • recurrent bacterial and viral infections
  • neutropaenia
Tags
Amber List (moderate evidence)
IFNG
Defects of intrinsic and innate immunity v1.19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • inherited susceptibility to mycobacterial diseases MONDO:0019146
Tags
Amber List (moderate evidence)
IGKC
Predominantly Antibody Deficiency v1.0
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • recurrent infections associated with rare immunoglobulin isotypes deficiency MONDO:0013576
Tags
Amber List (moderate evidence)
IKBKE
Defects of intrinsic and innate immunity v1.19
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
  • Literature
Phenotypes
  • Encephalitis, acute, infection-induced, susceptibility to, MONDO:0800174, IKBKE-related
Tags
Amber List (moderate evidence)
IKBKE
Susceptibility to Viral Infections v0.131
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Encephalitis, acute, infection-induced, susceptibility to, MONDO:0800174, IKBKE-related
Tags
Amber List (moderate evidence)
IL27RA
Susceptibility to Viral Infections v0.131
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Epstein-Barr virus infection MONDO:0005111 , IL27RA-related
Tags
Amber List (moderate evidence)
IL27RA
Disorders of immune dysregulation v1.5
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
  • Expert Review Amber
  • Literature
Phenotypes
  • Epstein-Barr virus infection MONDO:0005111 , IL27RA-related
Tags
Amber List (moderate evidence)
IL6R
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Recurrent pyogenic infections, cold abscesses
  • High circulating IL-6 levels
  • High IgE
  • IgE recurrent infection syndrome, MIM#618944
Tags
Amber List (moderate evidence)
INO80
Predominantly Antibody Deficiency v1.0
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Primary immunodeficiency, MONDO:0003778
Tags
Amber List (moderate evidence)
IRF3
Susceptibility to Viral Infections v0.131
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • {Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 7}, MIM# 616532
Tags
Amber List (moderate evidence)
IRF3
Defects of intrinsic and innate immunity v1.19
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
  • Expert Review Amber
  • Expert list
Phenotypes
  • encephalitis, acute, infection-induced, susceptibility to MONDO:0800174
Tags
Amber List (moderate evidence)
IRF9
Defects of intrinsic and innate immunity v1.19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
  • Expert Review Amber
  • Expert list
Phenotypes
  • immunodeficiency 65, susceptibility to viral infections MONDO:0032848
Tags
Amber List (moderate evidence)
IRF9
Susceptibility to Viral Infections v0.131
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 65, susceptibility to viral infections 618648
Tags
Amber List (moderate evidence)
ITGAV
Disorders of immune dysregulation v1.5
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Syndromic disease, MONDO:0002254, ITGAV-related
Tags
Amber List (moderate evidence)
JAK1
Defects of intrinsic and innate immunity v1.19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Susceptibility to mycobacteria and viruses
  • Viral infections
  • Autoinflammation, immunde dysregulation, and eosinophilia, MIM# 618999
Tags
Amber List (moderate evidence)
KIF23
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Anaemia, congenital dyserythropoietic, type IIIA 105600
Tags
Amber List (moderate evidence)
KMT2A
Combined Immunodeficiency v1.114
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Wiedemann-Steiner syndrome MIM#605130
Tags
Amber List (moderate evidence)
KNG1
Hereditary angioedema v1.5
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Hereditary angioedema-6 (HAE6), MIM#619363
Tags
Amber List (moderate evidence)
LAMTOR2
Phagocyte Defects v1.33
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency due to defect in MAPBP-interacting protein, MIM# 610798
Tags
Amber List (moderate evidence)
LCP1
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Bone marrow failure syndrome, MONDO:0000159, LCP1-related
Tags
Amber List (moderate evidence)
LCP1
Combined Immunodeficiency v1.114
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Bone marrow failure syndrome, MONDO:0000159, LCP1-related
Tags
Amber List (moderate evidence)
LCP2
Severe Combined Immunodeficiency (absent T absent B cells) v1.8
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 81, MIM# 619374
  • Severe combined immunodeficiency
Tags
Amber List (moderate evidence)
MADD
Disorders of immune dysregulation v1.5
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • HLH, enteropathy
Tags
Amber List (moderate evidence)
MAN2B2
Combined Immunodeficiency v1.114
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Congenital disorder of glycosylation, MONDO:0015286, MAN2B2-related
  • Combined Immune deficiency
Tags
Amber List (moderate evidence)
MAPK8
Defects of intrinsic and innate immunity v1.19
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
  • Literature
Phenotypes
  • Chronic mucocutaneous candidiasis
  • Connective tissue disorders
Tags
Amber List (moderate evidence)
MASTL
Bone Marrow Failure v1.112
1 review
Unknown
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Tags
Amber List (moderate evidence)
MCM10
Susceptibility to Viral Infections v0.131
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency-80 with or without congenital cardiomyopathy (IMD80), MIM#619313
  • Susceptibility to CMV
Tags
Amber List (moderate evidence)
MCM10
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 80 with or without congenital cardiomyopathy MONDO:0030266
Tags
Amber List (moderate evidence)
MCM4
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 54 MIM# 609981
  • Decreased NK cell number and function
  • Viral infections (EBV, HSV, VZV)
  • Short stature
  • B cell lymphoma
  • Adrenal failure
  • Failure to thrive
  • Microcephaly
  • Increased chromosomal breakage
  • Hyperpigmentation
  • Lymphadenopathy
Tags
  • founder
Amber List (moderate evidence)
MDM4
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Other
Phenotypes
  • bone marrow failure syndrome MONDO:0000159, MDM4-related
Tags
Amber List (moderate evidence)
MKL1
Phagocyte Defects v1.33
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Neutropaenia with combined immune deficiency
Tags
Amber List (moderate evidence)
MS4A1
Predominantly Antibody Deficiency v1.0
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 5, MIM# 613495
Tags
Amber List (moderate evidence)
MS4A1
Common Variable Immunodeficiency v1.12
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 5, MIM# 613495
Tags
Amber List (moderate evidence)
NFAT5
Disorders of immune dysregulation v1.5
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immune deficiency disease, MONDO:0003778, NFAT5-related
  • Recurrent infections
  • Autoimmune enterocolopathy
  • EBV susceptibility
  • HLH
Tags
Amber List (moderate evidence)
NFATC1
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Inborn error of immunity, MONDO:0003778, NFATC1-related
  • Combined Immune deficiency
Tags
Amber List (moderate evidence)
NFATC2
Susceptibility to Viral Infections v0.131
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Lymphoproliferative syndrome, MONDO:0016537, NFATC2-related
Tags
Amber List (moderate evidence)
NFATC2
Disorders of immune dysregulation v1.5
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
  • Literature
Phenotypes
  • Lymphoproliferative syndrome, MONDO:0016537, NFATC2-related
Tags
Amber List (moderate evidence)
NLRC4
Inflammatory bowel disease v0.122
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoinflammation with infantile enterocolitis, MIM# 616050
Tags
Amber List (moderate evidence)
NOP10
Bone Marrow Failure v1.112
2 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 1, MIM#224230
  • Pulmonary fibrosis and/or bone marrow failure syndrome, telomere-related, 9, MIM# 620400
Tags
Amber List (moderate evidence)
NOX1
Inflammatory bowel disease v0.122
2 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Inflammatory bowel disease, MONDO:0005265, NOX1-related
Tags
Amber List (moderate evidence)
NSMCE3
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Lung disease, immunodeficiency, and chromosome breakage syndrome, MIM#617241
Tags
Amber List (moderate evidence)
P2RY8
Disorders of immune dysregulation v1.5
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Systemic lupus erythematosus, MONDO:0007915, P2RY8-related
Tags
Amber List (moderate evidence)
PAX5
Predominantly Antibody Deficiency v1.0
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Neurodevelopmental disorder MONDO:0700092, PAX5-related
  • Hypogammaglobulinaemia
Tags
Amber List (moderate evidence)
PI4KA
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Gastrointestinal defects and immunodeficiency syndrome 2, MIM# 619708
Tags
Amber List (moderate evidence)
PIK3CG
Predominantly Antibody Deficiency v1.0
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 97 with autoinflammation, MIM# 619802
  • Humoral deficiency
  • Immune dysregulation
  • HLH
Tags
Amber List (moderate evidence)
PLCG1
Disorders of immune dysregulation v1.5
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert Review
  • Expert Review Amber
  • Literature
Phenotypes
  • Immune dysregulation, autoimmunity, and autoinflammation, MIM# 620514
Tags
Amber List (moderate evidence)
PMS2
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Mismatch repair cancer syndrome, MIM# 276300
Tags
Amber List (moderate evidence)
PMVK
Autoinflammatory Disorders v2.3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoinflammatory syndrome, MONDO:0019751, PMVK-related
Tags
Amber List (moderate evidence)
POLD2
Combined Immunodeficiency v1.114
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Non-severe combined immunodeficiency due to polymerase delta deficiency MONDO:0800145
  • Low CD4 T cells
  • Low B cells, normal maturation
  • recurrent respiratory tract infections, skin infections, warts and molluscum
  • short stature
  • intellectual disability
Tags
Amber List (moderate evidence)
POLD3
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 122, MIM# 620869
Tags
Amber List (moderate evidence)
POLR3A
Susceptibility to Viral Infections v0.131
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Severe VZV infection
Tags
Amber List (moderate evidence)
POLR3A
Defects of intrinsic and innate immunity v1.19
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
  • Expert Review Amber
  • Expert list
Phenotypes
  • varicella zoster infection MONDO:0005608
Tags
Amber List (moderate evidence)
POLR3C
Defects of intrinsic and innate immunity v1.19
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
  • Expert Review Amber
  • Expert list
Phenotypes
  • varicella zoster infection MONDO:0005608
Tags
Amber List (moderate evidence)
POLR3C
Susceptibility to Viral Infections v0.131
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Severe VZV infection
Tags
Amber List (moderate evidence)
POU2AF1
Predominantly Antibody Deficiency v1.0
3 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review
  • Literature
Phenotypes
  • Agammaglobulinaemia, MONDO:0015977, POU2AF1-related
Tags
Amber List (moderate evidence)
PSMA3
Autoinflammatory Disorders v2.3
1 review
Other
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 1 and digenic forms, MIM#256040
Tags
Amber List (moderate evidence)
PSMB4
Autoinflammatory Disorders v2.3
1 review
Other
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 3 and digenic forms, MIM# 617591
Tags
Amber List (moderate evidence)
PTPN13
Bone Marrow Failure v1.112
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • bone marrow failure syndrome MONDO#0000159, PTPN13-related
Tags
Amber List (moderate evidence)
PTPN2
Autoinflammatory Disorders v2.3
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Lupus
  • arthritis
  • common variable immunodeficiency
Tags
Amber List (moderate evidence)
RAC2
Common Variable Immunodeficiency v1.12
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Common variable immunodeficiency
Tags
Amber List (moderate evidence)
RAP1B
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Thrombocytopenia 1 with multiple congenital anomalies and dysmorphic facies, MIM# 620654
Tags
Amber List (moderate evidence)
RASGRP1
Autoimmune Lymphoproliferative Syndrome v1.0
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 64 MIM#618534
Tags
Amber List (moderate evidence)
RC3H1
Autoinflammatory Disorders v2.3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Relapsing HLH
  • Hemophagocytic lymphohistiocytosis, familial, 6, MIM# 618998
Tags
Amber List (moderate evidence)
REL
Combined Immunodeficiency v1.114
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 92, MIM# 619652
  • Combined immunodeficiency
  • T cells: normal, decreased memory CD4, poor proliferation
  • B cells: low, mostly naive, few switched memory B cells, impaired proliferation
  • Recurrent infections with bacteria, mycobacteria, salmonella and opportunistic organisms
  • Defective innate immunity
Tags
Amber List (moderate evidence)
REXO2
Autoinflammatory Disorders v2.3
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Type 1 interferonopathy of childhood, MONDO:0957408, REXO2-related
Tags
Amber List (moderate evidence)
RFWD3
Bone Marrow Failure v1.112
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Fanconi anemia, complementation group W, MIM# 617784
Tags
Amber List (moderate evidence)
RHOG
Disorders of immune dysregulation v1.5
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Genetic HLH, MONDO:0015541, RHOG-related
Tags
Amber List (moderate evidence)
RHOH
Combined Immunodeficiency v1.114
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {?Epidermodysplasia verruciformis, susceptibility to, 4}, MIM# 618307
Tags
Amber List (moderate evidence)
RIPK3
Defects of intrinsic and innate immunity v1.19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
  • Literature
Phenotypes
  • Hereditary susceptibility to infections, MONDO:0015979, RIPK3-related
Tags
Amber List (moderate evidence)
RIPK3
Susceptibility to Viral Infections v0.131
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Hereditary susceptibility to infections, MONDO:0015979, RIPK3-related
  • Recurrent HSV encephalitis
Tags
Amber List (moderate evidence)
RNASEL
Susceptibility to Viral Infections v0.131
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Multisystem inflammatory syndrome, MONDO:0035375, RNASEL-related
Tags
Amber List (moderate evidence)
RNASEL
Defects of intrinsic and innate immunity v1.19
3 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
  • Expert Review Amber
  • Literature
Phenotypes
  • Multisystem inflammatory syndrome, MONDO:0035375, RNASEL-related
Tags
Amber List (moderate evidence)
RNF31
Autoinflammatory Disorders v2.3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • Immunodeficiency 115 with autoinflammation, MIM# 620632
Tags
Amber List (moderate evidence)
RNF31
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 115 with autoinflammation, MIM# 620632
Tags
Amber List (moderate evidence)
RPL18
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Diamond-Blackfan anemia 18, MIM# 618310
Tags
Amber List (moderate evidence)
RPL31
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Diamond Blackfan anaemia
Tags
Amber List (moderate evidence)
RPL8
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Diamond-Blackfan anemia MONDO:0015253
Tags
Amber List (moderate evidence)
RPL9
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Diamond Blackfan anaemia
Tags
Amber List (moderate evidence)
RPS20
Bone Marrow Failure v1.112
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
  • Expert Review Amber
  • Literature
Phenotypes
  • Diamond Blackfan anaemia
Tags
Amber List (moderate evidence)
RPS28
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Diamond Blackfan anemia 15 with mandibulofacial dysostosis, MIM# 606164
Tags
Amber List (moderate evidence)
RPS29
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 13, MIM# 615909
Tags
Amber List (moderate evidence)
SCGN
Autoinflammatory Disorders v2.3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • ulcerative colitis, MONDO:0005101
Tags
Amber List (moderate evidence)
SH3KBP1
Predominantly Antibody Deficiency v1.0
2 reviews
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 61, MIM# 300310
Tags
  • SV/CNV
Amber List (moderate evidence)
SLC19A1
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Combined immunodeficiency, SLC19A1-related MONDO:0015131
Tags
Amber List (moderate evidence)
SLC9A3
Inflammatory bowel disease v0.122
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • Diarrhoea 8, secretory sodium, congenital 616868
  • Very Early Onset Inflammatory Bowel Disease
Tags
Amber List (moderate evidence)
SPPL2A
Defects of intrinsic and innate immunity v1.19
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Literature
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 86, MIM#619549
  • Susceptibility to mycobacteria and Salmonella
Tags
Amber List (moderate evidence)
SRP19
Phagocyte Defects v1.33
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neutropenia, MONDO:0001475, SRP19-related
Tags
Amber List (moderate evidence)
SRP19
Bone Marrow Failure v1.112
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neutropenia, MONDO:0001475, SRP19-related
Tags
Amber List (moderate evidence)
SRP68
Phagocyte Defects v1.33
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Neutropenia, severe congenital, 10, autosomal recessive, MIM# 620534
Tags
Amber List (moderate evidence)
SRP72
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Bone marrow failure syndrome 1, MIM# 614675
Tags
  • disputed
Amber List (moderate evidence)
SRPRA
Bone Marrow Failure v1.112
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Schwachman-Diamond syndrome MONDO:0009833, SRPA-related
Tags
Amber List (moderate evidence)
SRPRA
Phagocyte Defects v1.33
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Schwachman-Diamond syndrome MONDO:0009833, SRPA-related
Tags
Amber List (moderate evidence)
TAPBP
Combined Immunodeficiency v1.114
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare lymphocyte syndrome, type I, MIM# 604571
  • MHC class I deficiency 3, MIM# 620814
Tags
  • SV/CNV
Amber List (moderate evidence)
TBX21
Defects of intrinsic and innate immunity v1.19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 88, MIM# 619630
  • Susceptibility to mycobacterial disease
Tags
Amber List (moderate evidence)
TCIRG1
Phagocyte Defects v1.33
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • severe congenital neutropenia, MONDO:0018542
Tags
Amber List (moderate evidence)
TERC
Combined Immunodeficiency v1.114
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal dominant 1, MIM# 127550
Tags
Amber List (moderate evidence)
TERT
Combined Immunodeficiency v1.114
2 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Dyskeratosis congenita, autosomal dominant 2}, MIM# 613989
  • {Dyskeratosis congenita, autosomal recessive 4}, MIM# 613989
Tags
Amber List (moderate evidence)
TFRC
Combined Immunodeficiency v1.114
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 46, MIM# 616740
  • T cells: normal number, poor proliferation
  • B cells: normal number, low memory B cells
  • recurrent infections, neutorpaenia
  • thrombocytopaenia
Tags
Amber List (moderate evidence)
TGFB1
Disorders of immune dysregulation v1.5
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Inflammatory bowel disease, immunodeficiency, and encephalopathy MIM# 618213
Tags
Amber List (moderate evidence)
TGFB1
Inflammatory bowel disease v0.122
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Inflammatory bowel disease, immunodeficiency, and encephalopathy, MIM# 618213
Tags
Amber List (moderate evidence)
TINF2
Combined Immunodeficiency v1.114
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal dominant 3, MIM# 613990
  • Revesz syndrome, MIM# 268130
Tags
Amber List (moderate evidence)
TNFRSF13C
Predominantly Antibody Deficiency v1.0
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 4, MIM# 613494
Tags
Amber List (moderate evidence)
TNFRSF13C
Common Variable Immunodeficiency v1.12
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 4, MIM# 613494
Tags
Amber List (moderate evidence)
TP53
Bone Marrow Failure v1.112
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 5, MIM# 618165
Tags
Amber List (moderate evidence)
TRAC
Combined Immunodeficiency v1.114
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 7, TCR-alpha/beta deficient, MIM#615387
Tags
  • founder
Amber List (moderate evidence)
TRAF3IP2
Susceptibility to Fungal Infections v1.7
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 8, MIM# 615527
Tags
Amber List (moderate evidence)
TRAF3IP2
Defects of intrinsic and innate immunity v1.19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 8, MIM# 615527
Tags
Amber List (moderate evidence)
TYMS
Bone Marrow Failure v1.112
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Dyskeratosis congenita, digenic, MIM#620040
Tags
  • digenic
Amber List (moderate evidence)
UNC93B1
Defects of intrinsic and innate immunity v1.19
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 1
Tags
Amber List (moderate evidence)
UNC93B1
Susceptibility to Viral Infections v0.131
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 1
Tags
Amber List (moderate evidence)
WIPF1
Phagocyte Defects v1.33
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Wiskott-Aldrich syndrome 2, MIM# 614493
Tags
Amber List (moderate evidence)
XRCC2
Bone Marrow Failure v1.112
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anemia, complementation group U, MIM# 617247
Tags
Amber List (moderate evidence)
ZAP70
Inflammatory bowel disease v0.122
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Other
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 2
  • inflammatory colitis
Tags
Red List (low evidence)
APOL1
Defects of intrinsic and innate immunity v1.19
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Glomerulosclerosis, focal segmental, 4, susceptibility to} 612551
Tags
Red List (low evidence)
ATG4A
Defects of intrinsic and innate immunity v1.19
1 review
1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • infectious meningitis MONDO:0004796
Tags
Red List (low evidence)
ATG9A
Disorders of immune dysregulation v1.5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Autophagy-associated immune dysregulation and hyperplasia
Tags
Red List (low evidence)
C8G
Complement Deficiencies v0.74
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red List (low evidence)
CARD10
Disorders of immune dysregulation v1.5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 89 and autoimmunity, MIM# 619632
Tags
Red List (low evidence)
CASP4
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hereditary susceptibility to infection, MONDO:0015979, CASP4-related
  • Susceptibility to meliodiosis
Tags
Red List (low evidence)
CFHR1
Complement Deficiencies v0.74
2 reviews
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red List (low evidence)
CFHR2
Complement Deficiencies v0.74
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C3 glomerulopathy
  • C3G
  • Immune complex MPGN
  • IC-MPGN
Tags
  • SV/CNV
Red List (low evidence)
CFHR3
Complement Deficiencies v0.74
2 reviews
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Hemolytic uremic syndrome, atypical, susceptibility to}, MIM# 235400
Tags
Red List (low evidence)
CFHR4
Complement Deficiencies v0.74
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red List (low evidence)
CFHR5
Complement Deficiencies v0.74
2 reviews
1 green 1 red
Unknown
Sources
  • Expert Review Green
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Nephropathy due to CFHR5 deficiency, MIM# 614809
Tags
Red List (low evidence)
CLEC7A
Susceptibility to Fungal Infections v1.7
2 reviews
2 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Candidiasis, familial, 4, autosomal recessive MIM#613108
  • {Aspergillosis, susceptibility to} , MIM#614079
  • Mucocutaneous candidiasis
Tags
Red List (low evidence)
COL7A1
Inflammatory bowel disease v0.122
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Epidermolysis bullosa dystrophica, AR, MIM# 226600
Tags
Red List (low evidence)
CRACR2A
Combined Immunodeficiency v1.114
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • primary immunodeficiency disease, MONDO:0003778, CRACR2A-associated
  • late onset combined immunodeficiency
Tags
Red List (low evidence)
DBF4
Phagocyte Defects v1.33
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • severe congenital neutropenia MONDO:0018542
Tags
Red List (low evidence)
DCLRE1B
Combined Immunodeficiency v1.114
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita and Hoyeraal-Hreidarsson (HH) syndrome
Tags
Red List (low evidence)
ERN1
Disorders of immune dysregulation v1.5
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immune dysregulation
Tags
Red List (low evidence)
FAAP24
Disorders of immune dysregulation v1.5
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency-associated lymphoproliferative disease, MONDO:0020083, FAAP24-related
Tags
Red List (low evidence)
FANCM
Bone Marrow Failure v1.112
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Fanconi anaemia
Tags
  • refuted
Red List (low evidence)
FBXW11
Autoinflammatory Disorders v2.3
2 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Autoinflammatory disorder MONDO:0019751, FBXW11-related
Tags
Red List (low evidence)
FECH
Bone Marrow Failure v1.112
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Protoporphyria, erythropoietic, 1, MIM# 177000
Tags
Red List (low evidence)
FERMT1
Inflammatory bowel disease v0.122
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Kindler syndrome, MIM# 173650
Tags
Red List (low evidence)
FMNL2
Inflammatory bowel disease v0.122
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • inflammatory bowel disease, MONDO:0005265, FMNL2-related
Tags
Red List (low evidence)
FPR1
Phagocyte Defects v1.33
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Periodontitis
Tags
Red List (low evidence)
FUT2
Susceptibility to Viral Infections v0.131
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Norwalk virus infection, resistance to
Tags
Red List (low evidence)
GINS4
Combined Immunodeficiency v1.114
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • combined immunodeficiency MONDO:0015131
Tags
Red List (low evidence)
GTF3A
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • herpes simplex encephalitis MONDO:0012521
Tags
Red List (low evidence)
HS3ST6
Hereditary angioedema v1.5
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Hereditary angioedema-8 (HAE8), MIM#619367
Tags
Red List (low evidence)
IL12RB2
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Susceptibility to mycobacteria and Salmonella
Tags
Red List (low evidence)
IL17F
Susceptibility to Fungal Infections v1.7
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 6, autosomal dominant, MIM# 613956
Tags
Red List (low evidence)
IL17F
Defects of intrinsic and innate immunity v1.19
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 6, autosomal dominant, MIM# 613956
Tags
Red List (low evidence)
IL18BP
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
  • Expert list
Phenotypes
  • {?Hepatitis, fulminant viral, susceptibility to} 618549
Tags
Red List (low evidence)
IL18BP
Susceptibility to Viral Infections v0.131
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • {?Hepatitis, fulminant viral, susceptibility to} 618549
Tags
Red List (low evidence)
IL1R1
Autoinflammatory Disorders v2.3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Chronic recurrent multifocal osteomyelitis 3, MIM# 259680
Tags
Red List (low evidence)
IL21
Combined Immunodeficiency v1.114
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 11, MIM# 615767
Tags
Red List (low evidence)
IL21
Inflammatory bowel disease v0.122
3 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert Review
Phenotypes
  • Immunodeficiency, common variable, 11, MIM# 615767
Tags
Red List (low evidence)
IL21
Common Variable Immunodeficiency v1.12
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immunodeficiency, common variable, 11 MIM#615767
Tags
Red List (low evidence)
IL37
Inflammatory bowel disease v0.122
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Inflammatory bowel disease (infantile ulcerative colitis) 31, MIM# 619398
Tags
Red List (low evidence)
IL6ST
Autoinflammatory Disorders v2.3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immunodeficiency 94 with autoinflammation and dysmorphic facies 619750
Tags
Red List (low evidence)
IRAK1
Defects of intrinsic and innate immunity v1.19
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Susceptibility to bacterial infections
Tags
  • SV/CNV
Red List (low evidence)
IRAK2
Defects of intrinsic and innate immunity v1.19
2 reviews
2 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immune dysregulation, MONDO:0957790, IRAK2-related
Tags
Red List (low evidence)
IRAK2
Autoinflammatory Disorders v2.3
2 reviews
2 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immune dysregulation, MONDO:0957790, IRAK2-related
Tags
Red List (low evidence)
ITGAM
Complement Deficiencies v0.74
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red List (low evidence)
ITPKB
Severe Combined Immunodeficiency (absent T present B cells) v1.9
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Severe combined immunodeficiency, absent T cells, present B cells and NK cells
Tags
Red List (low evidence)
LSM11
Autoinflammatory Disorders v2.3
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome MONDO:0018866
Tags
Red List (low evidence)
LY96
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Inborn error of immunity, MONDO:0003778, LY96-related
Tags
Red List (low evidence)
LY96
Inflammatory bowel disease v0.122
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Inborn error of immunity, MONDO:0003778, LY96-related
  • Colitis
Tags
Red List (low evidence)
MAD2L2
Bone Marrow Failure v1.112
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Fanconi anemia, complementation group V, MIM# 617243
Tags
Red List (low evidence)
MAP1LC3B2
Defects of intrinsic and innate immunity v1.19
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Other
Phenotypes
  • Hereditary susceptibility to infection, MONDO:0015979, MAP1LC3B2 -related
  • Mollaret’s meningitis (recurrent lymphocytic meningitis) due to HSV2
Tags
Red List (low evidence)
MASP2
Complement Deficiencies v0.74
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • MASP2 deficiency, MIM# 613791
Tags
Red List (low evidence)
MSH6
Predominantly Antibody Deficiency v1.0
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Mismatch repair cancer syndrome 3 MIM#619097
  • constitutional mismatch repair deficiency
  • immunodeficiency
Tags
Red List (low evidence)
MYOF
Hereditary angioedema v1.5
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Hereditary angioedema-7 (HAE7), MIM#619366
Tags
Red List (low evidence)
NFKBID
Combined Immunodeficiency v1.114
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red List (low evidence)
NFKBID
Predominantly Antibody Deficiency v1.0
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red List (low evidence)
NFKBID
Common Variable Immunodeficiency v1.12
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red List (low evidence)
NLRP1
Susceptibility to Viral Infections v0.131
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Recurrent respiratory papillomatosis
Tags
Red List (low evidence)
NOP10
Combined Immunodeficiency v1.114
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 1, MIM#224230
Tags
Red List (low evidence)
NOS2
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
  • Expert list
Phenotypes
  • inborn error of immunity MONDO:0003778
Tags
Red List (low evidence)
NOS2
Susceptibility to Viral Infections v0.131
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Disseminated CMV disease
Tags
Red List (low evidence)
OAS1
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Multisystem inflammatory syndrome in children and adults MONDO:0035375
Tags
Red List (low evidence)
PACSIN1
Disorders of immune dysregulation v1.5
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • systemic lupus erythematosis
  • vasculitis
  • nephritis
Tags
Red List (low evidence)
PDCD1
Disorders of immune dysregulation v1.5
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Autoimmune disease with susceptibility to mycobacterium tuberculosis, MIM# 621004
Tags
Red List (low evidence)
PMM2
Inflammatory bowel disease v0.122
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Congenital disorder of glycosylation, type Ia, MIM# 212065
  • Inflammatory bowel disease, hyperinsulinism, polycystic kidney disease
Tags
Red List (low evidence)
POLE
Bone Marrow Failure v1.112
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • MONDO:0002254 syndromic disease
Tags
Red List (low evidence)
POLE2
Combined Immunodeficiency v1.114
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Combined immunodeficiency
  • Lymphopaenia
  • Lack of TRECS, absent proliferation in response to antigens
  • Hypoglobulinaemia
  • Recurrent infections, disseminated BCG infections
  • Autoimmunity
  • Facial dysmorphism
Tags
Red List (low evidence)
POLR3F
Susceptibility to Viral Infections v0.131
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 101 (varicella zoster virus-specific), MIM# 619872
Tags
Red List (low evidence)
POLR3F
Defects of intrinsic and innate immunity v1.19
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 101 (varicella zoster virus-specific), MIM# 619872
Tags
Red List (low evidence)
PSMA5
Autoinflammatory Disorders v2.3
1 review
1 red
Other
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Inborn error of immunity, MONDO:0003778, PSMA5-related
  • PRAAS/CANDLE
Tags
Red List (low evidence)
PSMG2
Autoinflammatory Disorders v2.3
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 4, MIM# 619183
  • CANDLE syndrome
  • Chronic atypical neutrophilic dermatitis with lipodystrophy
Tags
Red List (low evidence)
PTEN
Inflammatory bowel disease v0.122
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Colitis
Tags
Red List (low evidence)
RAD51
Bone Marrow Failure v1.112
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Fanconi anemia complementation group R MONDO:0014986
Tags
Red List (low evidence)
RBSN
Bone Marrow Failure v1.112
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Myelofibrosis, congenital, with anemia, neutropenia, developmental delay, and ocular abnormalities, MIM# 620939
Tags
Red List (low evidence)
RGS10
Combined Immunodeficiency v1.114
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immunodeficiency
  • short stature
Tags
Red List (low evidence)
RPL27
Bone Marrow Failure v1.112
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 16, MIM# 617408
Tags
Red List (low evidence)
RPL35
Bone Marrow Failure v1.112
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Diamond-Blackfan anemia 19, MIM# 618312
Tags
Red List (low evidence)
RPS15A
Bone Marrow Failure v1.112
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Diamond-Blackfan anemia 20, MIM# 618313
Tags
Red List (low evidence)
RPS27
Bone Marrow Failure v1.112
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 17, MIM# 617409
Tags
Red List (low evidence)
SEMA3E
Combined Immunodeficiency v1.114
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • CHARGE syndrome, MIM# 214800
Tags
Red List (low evidence)
SIRT1
Autoinflammatory Disorders v2.3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • autoimmune disease, MONDO:0007179, SIRT1-related
Tags
Red List (low evidence)
SLC30A7
Bone Marrow Failure v1.112
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert Review
Phenotypes
  • Ziegler-Huang syndrome, MIM# 620501
Tags
Red List (low evidence)
TAOK2
Susceptibility to Viral Infections v0.131
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Other
Phenotypes
  • Generalized verrucosis
  • abnormal T cell activation
Tags
Red List (low evidence)
THBD
Complement Deficiencies v0.74
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Hemolytic uremic syndrome, atypical, susceptibility to, 6}, MIM# 612926
Tags
Red List (low evidence)
TIRAP
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Staphylococcal disease during childhood
Tags
Red List (low evidence)
TKFC
Combined Immunodeficiency v1.114
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Inborn error of immunity, MONDO:0003778, TKFC-related
Tags
Red List (low evidence)
TLR4
Defects of intrinsic and innate immunity v1.19
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Inflammatory bowel disease MONDO:0005265
Tags
Red List (low evidence)
TNFRSF4
Combined Immunodeficiency v1.114
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 16, MIM# 615593
Tags
Red List (low evidence)
TNFRSF4
Susceptibility to Viral Infections v0.131
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 16, MIM# 615593
Tags
Red List (low evidence)
TNFSF12
Common Variable Immunodeficiency v1.12
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Recurrent infections, poor antibody responses, decreased immunoglobulins
Tags
Red List (low evidence)
TNFSF12
Predominantly Antibody Deficiency v1.0
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Recurrent infections, poor antibody responses, decreased immunoglobulins
Tags
Red List (low evidence)
TNFSF13
Predominantly Antibody Deficiency v1.0
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
  • Expert Review Red
  • Literature
Phenotypes
  • Hypogammaglobulinaemia, MONDO:0015977, TNSF13-related
Tags
Red List (low evidence)
TNFSF9
Susceptibility to Viral Infections v0.131
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hereditary susceptibility to infections, MONDO:0015979, TNFSF9-related
Tags
Red List (low evidence)
TNFSF9
Disorders of immune dysregulation v1.5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
  • Literature
Phenotypes
  • Hereditary susceptibility to infections, MONDO:0015979, TNFSF9-related
Tags
Red List (low evidence)
TOM1
Combined Immunodeficiency v1.114
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 85 and autoimmunity, MIM# 619510
Tags
Red List (low evidence)
TPP1
Combined Immunodeficiency v1.114
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hoyeraal-Hreidarsson syndrome
Tags
Red List (low evidence)
TRAF3
Susceptibility to Viral Infections v0.131
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {?Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 5}, MIM# 614849
Tags
Red List (low evidence)
TRAF3
Defects of intrinsic and innate immunity v1.19
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {?Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 5}, MIM# 614849
Tags
Red List (low evidence)
TRIM69
Susceptibility to Viral Infections v0.131
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Susceptibility to herpes simplex encephalitis
Tags
Red List (low evidence)
TSR2
Bone Marrow Failure v1.112
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Diamond-Blackfan anemia 14 with mandibulofacial dysostosis, MIM# 300946
Tags
Red List (low evidence)
UNC119
Combined Immunodeficiency v1.114
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • ?Immunodeficiency 13 MIM#615518
Tags
Red List (low evidence)
VAV1
Common Variable Immunodeficiency v1.12
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Common variable immnodeficiency
Tags
No list
ELF4
Inflammatory bowel disease v0.122
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Literature
Phenotypes
  • Inflammatory bowel disease
Tags

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  • Green list (high evidence)
  • Green and Amber Genes
  • Amber Genes
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