Combined Immunodeficiency
Gene: CHUKEnsemblGeneIds (GRCh38): ENSG00000213341
EnsemblGeneIds (GRCh37): ENSG00000213341
OMIM: 600664, Gene2Phenotype
CHUK is in 4 panels
2 reviews
Chirag Patel (Genetic Health Queensland)
PMID: 34533979
3 affected individuals from 2 unrelated (but from same region) consanguineous Turkish families, presenting with
recurrent viral/bacterial/fungal infections, absence of secondary lymphoid organs, hypogammaglobulinemia, and limited diversity of T and B cell receptors with evidence of autoreactivity.
WES identified the same homozygous germline missense variant (c.499 G > A, p.G167R) in the CHUK gene (IKKα) in both families. IKKα serves as an essential upstream regulator of the non-canonical NF-κB pathway, which is a critical regulator of immunity, and genetic variations in genes that regulate this pathway can lead to various forms of inborn errors of immunity. The variant segregated with disease with parents as heterozygous carriers. The variant is in the activation segment of the kinase domain and affects the conserved (DF/LG) motif responsible for coordinating magnesium atoms for ATP binding. Supportive immunology assays for the pathway.Created: 9 Dec 2024, 11:49 p.m. | Last Modified: 9 Dec 2024, 11:49 p.m.
Panel Version: 1.112
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Combined immunodeficiency, MONDO:0015131, CHUK-related
Publications
- PMID: 34533979
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
PMID 34533979: single individual reported with homozygous missense variant in this gene and recurrent infections, skeletal abnormalities, absent secondary lymphoid structures, reduced B cell numbers, hypogammaglobulinemia, and lymphocytic infiltration of intestine. Supportive functional data.
Sources: LiteratureCreated: 6 Dec 2022, 10:57 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Combined immunodeficiency, MONDO:0015131, CHUK-related
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Literature
- Phenotypes
-
- Combined immunodeficiency, MONDO:0015131, CHUK-related
- OMIM
- 600664
- Clinvar variants
- Variants in CHUK
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Chirag Patel (Genetic Health Queensland)Gene: chuk has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: chuk has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: chuk has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: CHUK was added gene: CHUK was added to Combined Immunodeficiency. Sources: Literature Mode of inheritance for gene: CHUK was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: CHUK were set to 34533979 Phenotypes for gene: CHUK were set to Combined immunodeficiency, MONDO:0015131, CHUK-related Review for gene: CHUK was set to AMBER