Combined Immunodeficiency

Gene: CHUK

Green List (high evidence)

CHUK (conserved helix-loop-helix ubiquitous kinase)
EnsemblGeneIds (GRCh38): ENSG00000213341
EnsemblGeneIds (GRCh37): ENSG00000213341
OMIM: 600664, Gene2Phenotype
CHUK is in 4 panels

2 reviews

Chirag Patel (Genetic Health Queensland)

Green List (high evidence)

PMID: 34533979
3 affected individuals from 2 unrelated (but from same region) consanguineous Turkish families, presenting with
recurrent viral/bacterial/fungal infections, absence of secondary lymphoid organs, hypogammaglobulinemia, and limited diversity of T and B cell receptors with evidence of autoreactivity.

WES identified the same homozygous germline missense variant (c.499 G > A, p.G167R) in the CHUK gene (IKKα) in both families. IKKα serves as an essential upstream regulator of the non-canonical NF-κB pathway, which is a critical regulator of immunity, and genetic variations in genes that regulate this pathway can lead to various forms of inborn errors of immunity. The variant segregated with disease with parents as heterozygous carriers. The variant is in the activation segment of the kinase domain and affects the conserved (DF/LG) motif responsible for coordinating magnesium atoms for ATP binding. Supportive immunology assays for the pathway.
Created: 9 Dec 2024, 11:49 p.m. | Last Modified: 9 Dec 2024, 11:49 p.m.
Panel Version: 1.112

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Combined immunodeficiency, MONDO:0015131, CHUK-related

Publications

Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

I don't know

PMID 34533979: single individual reported with homozygous missense variant in this gene and recurrent infections, skeletal abnormalities, absent secondary lymphoid structures, reduced B cell numbers, hypogammaglobulinemia, and lymphocytic infiltration of intestine. Supportive functional data.
Sources: Literature
Created: 6 Dec 2022, 10:57 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Combined immunodeficiency, MONDO:0015131, CHUK-related

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, CHUK-related
OMIM
600664
Clinvar variants
Variants in CHUK
Penetrance
None
Publications
Panels with this gene

History Filter Activity

9 Dec 2024, Gel status: 3

Entity classified by Genomics England curator

Chirag Patel (Genetic Health Queensland)

Gene: chuk has been classified as Green List (High Evidence).

6 Dec 2022, Gel status: 2

Entity classified by Genomics England curator

Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

Gene: chuk has been classified as Amber List (Moderate Evidence).

6 Dec 2022, Gel status: 2

Entity classified by Genomics England curator

Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

Gene: chuk has been classified as Amber List (Moderate Evidence).

6 Dec 2022, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

gene: CHUK was added gene: CHUK was added to Combined Immunodeficiency. Sources: Literature Mode of inheritance for gene: CHUK was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: CHUK were set to 34533979 Phenotypes for gene: CHUK were set to Combined immunodeficiency, MONDO:0015131, CHUK-related Review for gene: CHUK was set to AMBER