Deafness_IsolatedAndComplex
Gene: SLITRK6EnsemblGeneIds (GRCh38): ENSG00000184564
EnsemblGeneIds (GRCh37): ENSG00000184564
OMIM: 609681, Gene2Phenotype
SLITRK6 is in 4 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Additional non-Amish family reported.Created: 29 Jan 2020, 6:17 a.m. | Last Modified: 29 Jan 2020, 6:17 a.m.
Panel Version: 0.306
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Deafness and myopia, MIM#221200
Publications
Lilian Downie (Victorian Clinical Genetics Services)
The SLITRK6 gene has been associated with autosomal recessive deafness and myopia using the ClinGen Clinical Validity Framework as of 1/4/2017. This association was made using case-level data only. At least 3 nonsense variants have been reported in humans. SLITRK6 was first associated with this disease in humans as early as 2013 (Tekin et al.). Association is seen in at least 3 probands in 1 publication (23543054). Variants in this gene segregated with disease in 7 additional family members. This gene-disease association is supported by a mouse model and expression studies (Tekin et al. 2013 and Katayama et al. 2009). In summary, there is strong evidence to support the association between SLITRK6 and autosomal recessive deafness and myopia.Created: 28 Jan 2020, 11:12 p.m. | Last Modified: 28 Jan 2020, 11:12 p.m.
Panel Version: 0.256
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
deafness and myopia
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Melbourne Genomics Health Alliance Deafness Flagship
- Victorian Clinical Genetics Services
- Phenotypes
-
- deafness and myopia, MIM#221200
- OMIM
- 609681
- Clinvar variants
- Variants in SLITRK6
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: SLITRK6 were set to 23543054; 29551497
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: SLITRK6 were set to 23543054
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: slitrk6 has been classified as Green List (High Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: SLITRK6 were changed from to deafness and myopia, MIM#221200
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: SLITRK6 were set to
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: SLITRK6 was changed from BIALLELIC, autosomal or pseudoautosomal to BIALLELIC, autosomal or pseudoautosomal
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: SLITRK6 was changed from Unknown to BIALLELIC, autosomal or pseudoautosomal
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: SLITRK6 was added gene: SLITRK6 was added to Deafness_MelbourneGenomics_VCGS. Sources: Expert Review Green,Victorian Clinical Genetics Services,Melbourne Genomics Health Alliance Deafness Flagship Mode of inheritance for gene: SLITRK6 was set to Unknown