Mitochondrial disease
Gene: PNPT1EnsemblGeneIds (GRCh38): ENSG00000138035
EnsemblGeneIds (GRCh37): ENSG00000138035
OMIM: 610316, Gene2Phenotype
PNPT1 is in 7 panels
3 reviews
Arina Puzriakova (Genomics England)
6 additional unrelated cases identified by Pennisi et al., 2022 (PMID: 33199448) with biallelic variants in this gene.Created: 1 Apr 2022, 10:25 a.m. | Last Modified: 1 Apr 2022, 10:25 a.m.
Panel Version: 0.12453
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Combined oxidative phosphorylation deficiency 13, OMIM:614932
Publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Three families reported with heterozygous variants and SCA25. Incomplete penetrance in one of the families. In the third family, the variant was inherited from an asymptomatic 80+ year old. Note bi-allelic variants in this gene cause a mitochondrial disorder. Exact mechanism through which mono-allelic variants cause SCA25 not elucidated: authors speculate abnormal accumulation of mitochondrial RNA with subsequent leakage into the cytosol that may trigger a type 1 interferon response leading to neuroinflammation with neuronal dysfunction or neuronal loss.Created: 13 Jul 2022, 11:56 p.m. | Last Modified: 13 Jul 2022, 11:56 p.m.
Panel Version: 1.114
Comment when marking as ready: Those initially presenting with deafness may be at risk of progressive complex neurological course.Created: 21 Feb 2020, 8:41 p.m. | Last Modified: 21 Feb 2020, 8:41 p.m.
Panel Version: 0.1418
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Spinocerebellar ataxia 25, MIM# 608703
Publications
Crystle Lee (Victorian Clinical Genetics Services)
Well-reported in patients with mitochondrial dysfunctionCreated: 20 Feb 2020, 9:58 p.m. | Last Modified: 20 Feb 2020, 9:58 p.m.
Panel Version: 0.85
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Combined oxidative phosphorylation deficiency 13 (MIM#614932); Deafness, autosomal recessive 70 (MIM#614934)
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Expert Review Green
- Victorian Clinical Genetics Services
- Australian Genomics Health Alliance Mitochondrial Flagship
- Victorian Clinical Genetics Services
- Phenotypes
-
- Combined oxidative phosphorylation deficiency 13 (MIM#614932)
- Deafness, autosomal recessive 70 (MIM#614934)
- OMIM
- 610316
- Clinvar variants
- Variants in PNPT1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: pnpt1 has been classified as Green List (High Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: PNPT1 were changed from to Combined oxidative phosphorylation deficiency 13 (MIM#614932); Deafness, autosomal recessive 70 (MIM#614934)
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: PNPT1 were set to
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: PNPT1 was changed from Unknown to BIALLELIC, autosomal or pseudoautosomal
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: PNPT1 was added gene: PNPT1 was added to Mitochondrial_AGHA_VCGS. Sources: Expert Review Green,Australian Genomics Health Alliance Mitochondrial Flagship,Victorian Clinical Genetics Services Mode of inheritance for gene: PNPT1 was set to Unknown