Renal Ciliopathies and Nephronophthisis
Gene: PDIA6EnsemblGeneIds (GRCh38): ENSG00000143870
EnsemblGeneIds (GRCh37): ENSG00000143870
OMIM: 611099, Gene2Phenotype
PDIA6 is in 6 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Upgraded to Amber in view of the functional data.Created: 14 Apr 2021, 10:18 a.m. | Last Modified: 14 Apr 2021, 10:18 a.m.
Panel Version: 0.140
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Asphyxiating thoracic dystrophy (ATD) syndrome and infantile‐onset diabetes
Chirag Patel (Genetic Health Queensland)
2nd patient with large polycystic kidneys, death and end stage renal failure at 18 months, microcephaly, bilateral inguinal hernias, umbilical hernia, developmental delay, bilateral sensorineural hearing loss, visual impairment, steatorrhea, fibrotic changes in liver, and insulin-dependent diabetes. WGS found homozygous stop-gain variant (Tyr368*) in PDIA6. Segregation not performed.Created: 17 Nov 2022, 12:57 a.m. | Last Modified: 17 Nov 2022, 12:57 a.m.
Panel Version: 1.13
1 case with asphyxiating thoracic dystrophy (ATD) syndrome and infantile‐onset diabetes. Whole exome sequencing revealed a homozygous frameshift variant in the PDIA6 gene. RNA expression was reduced in a gene dosage‐dependent manner, supporting a loss‐of‐function effect of this variant. Phenotypic correlation with the previously reported mouse model recapitulated the growth defect and delay, early lethality, coagulation, diabetes, immunological, and polycystic kidney disease phenotypes. The phenotype of the current patient is consistent with phenotypes associated with the disruption of PDIA6 and the sensors of UPR in mice and humans.
Sources: LiteratureCreated: 14 Apr 2021, 6:07 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Polycystic kidney disease, infancy-onset diabetes, and microcephaly
Publications
- PMID: 35856135
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Literature
- Phenotypes
-
- Asphyxiating thoracic dystrophy (ATD) syndrome and infantile‐onset diabetes
- OMIM
- 611099
- Clinvar variants
- Variants in PDIA6
- Penetrance
- None
- Publications
-
- PMID: 33495992
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: pdia6 has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: pdia6 has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Chirag Patel (Genetic Health Queensland)gene: PDIA6 was added gene: PDIA6 was added to Renal Ciliopathies and Nephronophthisis. Sources: Literature Mode of inheritance for gene: PDIA6 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: PDIA6 were set to PMID: 33495992 Phenotypes for gene: PDIA6 were set to Asphyxiating thoracic dystrophy (ATD) syndrome and infantile‐onset diabetes Review for gene: PDIA6 was set to RED