Optic Atrophy
Gene: SPG7EnsemblGeneIds (GRCh38): ENSG00000197912
EnsemblGeneIds (GRCh37): ENSG00000197912
OMIM: 602783, Gene2Phenotype
SPG7 is in 10 panels
3 reviews
Elena Savva (Victorian Clinical Genetics Services)
PMID: 32548275 - fs reported in AD optic atrophy where in NMD-predicted regions of the protein, were either isolated cases (1 proband) or segregated in a single family (2 affected).
**Several families with missense variants had more extensive segregation within families, and one was de novo - this is in ANOTHER gene, NOT SPG7Created: 18 Jan 2024, 3:44 a.m. | Last Modified: 18 Jan 2024, 3:44 a.m.
Panel Version: 1.27
PMID: 32548275 - fs reported in AD optic atrophy where in NMD-predicted regions of the protein, were either isolated cases (1 proband) or segregated in a single family (2 affected). Several families with missense variants in this gene had more extensive segregation within families, and one was de novo.
PMID: 36367250 - additional de novo missense variant, patient had OA but also nystagmus. Fig 2 shows a summary of all OA variants in SPG7, lists a total of 4 NMD PTCs
PMID: 35243150 - 57yo patient with a homozygous start loss and childhood optic nerve atrophy. Had subtle signs of spastic paraplegia. Fx was "unremarkable"Created: 27 Apr 2023, 1:46 a.m. | Last Modified: 27 Apr 2023, 1:46 a.m.
Panel Version: 1.12
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Optical atrophy MONDO#0003608)
Publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
Comment when marking as ready: Note bi-allelic variants are associated with spastic paraplegia.Created: 18 Feb 2021, 3:58 a.m. | Last Modified: 18 Feb 2021, 3:58 a.m.
Panel Version: 0.128
Teresa Zhao (Victorian Clinical Genetics Services)
7 families reported for AD OA, including 5 missense and 2 frameshift variants.Created: 18 Feb 2021, 1:51 a.m. | Last Modified: 18 Feb 2021, 1:51 a.m.
Panel Version: 0.125
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
autosomal dominant optical atrophy
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Victorian Clinical Genetics Services
- Phenotypes
-
- autosomal dominant optical atrophy
- OMIM
- 602783
- Clinvar variants
- Variants in SPG7
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: spg7 has been classified as Green List (High Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: SPG7 were changed from to autosomal dominant optical atrophy
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: SPG7 were set to
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: SPG7 was changed from Unknown to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: SPG7 was added gene: SPG7 was added to Optic Atrophy_VCGS. Sources: Expert Review Green,Victorian Clinical Genetics Services Mode of inheritance for gene: SPG7 was set to Unknown