Osteogenesis Imperfecta and Osteoporosis
Gene: P3H1EnsemblGeneIds (GRCh38): ENSG00000117385
EnsemblGeneIds (GRCh37): ENSG00000117385
OMIM: 610339, Gene2Phenotype
P3H1 is in 10 panels
2 reviews
Tashunka Taylor-Miller (Victorian Clinical Genetics Services)
11 new patients from seven related families from the Karen population affected with OI type VIII. chr1:43212857A > G variant suspected to be founder effect from Karen ancestry.
Suggestion that isoform a is the functional isoform that can modify the collagen precursor protein in the endoplasmic reticulum.
Homozygous P3H1 (chr1:43212857A > G; NM_001243246.1; c.2141A > G) variants in coding region of isoform c.
The same variant P3H1 (chr1:43212857A > G; NM_022356.4:c.2055 + 86A > G) lies in non-coding region of isoform a. Splice site prediction algorithm ASSP suggests this variant creates a new “CAG” splice acceptor sequence, which is predicted to result in an alternative, novel C-terminal sequence and premature protein truncation.
All 11 patients had similar radiology appearance: generalised osteopenia, short thorax, platyspondyly, slender ribs, rhizomelia, slender curved long bones, multiple fractures. Metaphyses bulbous, flared, and irregularly ossified ('pop corn calcifications'). Phalanges appeared long. No patient had blue sclera.Created: 29 Apr 2024, noon | Last Modified: 29 Apr 2024, noon
Panel Version: 0.113
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Osteopenia HP:0000938; Platyspondyly HP:0000926; MONDO:0012581
Publications
- PMID: 36833249
Mode of pathogenicity
Other
Ain Roesley (Victorian Clinical Genetics Services)
PMID: 17277775; 5 families including functional studies of c.1080+1G>T, which results in 5 alternatively spliced isoforms
PMID: 18566967; 16 probandsCreated: 18 May 2020, 6:20 a.m. | Last Modified: 18 May 2020, 6:20 a.m.
Panel Version: 0.18
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Osteogenesis imperfecta, type VIII, (MIM# 610915)
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Victorian Clinical Genetics Services
- Phenotypes
-
- Osteogenesis imperfecta, type VIII, (MIM# 610915)
- Tags
- OMIM
- 610339
- Clinvar variants
- Variants in P3H1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: P3H1 were set to 17277775; 18566967
Added Tag
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Tag founder tag was added to gene: P3H1.
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: p3h1 has been classified as Green List (High Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: P3H1 were changed from to Osteogenesis imperfecta, type VIII, (MIM# 610915)
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: P3H1 were set to
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: P3H1 was changed from Unknown to BIALLELIC, autosomal or pseudoautosomal
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: P3H1 was added gene: P3H1 was added to Osteogenesis imperfecta_VCGS. Sources: Expert Review Green,Victorian Clinical Genetics Services Mode of inheritance for gene: P3H1 was set to Unknown