Hypertrophic cardiomyopathy_HCM
Gene: NEXNEnsemblGeneIds (GRCh38): ENSG00000162614
EnsemblGeneIds (GRCh37): ENSG00000162614
OMIM: 613121, Gene2Phenotype
NEXN is in 10 panels
2 reviews
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
ClinGen curation: Two probands reported in a single 2010 publication (Wang et al, PMID 20970104). Two unique missense variants were reported in this publication. The pathogenicity of one variant was supported by functional studies in a cell culture model system that showed mutant protein fragments accumulated in the cytoplasm and failed to bind to actin filaments. This variant also segregated with disease in 2 additional family members. The second variant reported by Wang et al. was found at a high frequency in the ExAC database, which is consistent with benign variation. The mechanism for disease is unknown. This gene-disease association is supported by a cell culture model system, expression studies and localization of NEXN to the intercalated disk (Hassel et al, 2009, PMID 1988149; Somi et al, 2016, 27148881), and interaction with alpha actin (Wang et al, PMID 20970104).
In summary: one family plus functional data.Created: 21 Jun 2020, 7:56 a.m. | Last Modified: 21 Jun 2020, 7:56 a.m.
Panel Version: 0.77
Phenotypes
Cardiomyopathy, hypertrophic, 20, MIM# 613876
Publications
Ivan Macciocca (Victorian Clinical Genetics Services)
LIMITED evidence by ClinGen HCM working group PMID: 30681346Created: 21 Jun 2020, 6:35 a.m. | Last Modified: 21 Jun 2020, 6:35 a.m.
Panel Version: 0.67
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
HCM
Publications
- PMID: 30681346
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Red
- Victorian Clinical Genetics Services
- Phenotypes
-
- Cardiomyopathy, hypertrophic, 20, MIM# 613876
- OMIM
- 613121
- Clinvar variants
- Variants in NEXN
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: nexn has been classified as Red List (Low Evidence).
Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Phenotypes for gene: NEXN were changed from to Cardiomyopathy, hypertrophic, 20, MIM# 613876
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: NEXN were set to
Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of inheritance for gene: NEXN was changed from Unknown to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: nexn has been classified as Red List (Low Evidence).
Created, Added New Source, Set mode of inheritance
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: NEXN was added gene: NEXN was added to Hypertrophic cardiomyopathy_VCGS. Sources: Expert Review Green,Victorian Clinical Genetics Services Mode of inheritance for gene: NEXN was set to Unknown