Glaucoma congenital
Gene: DDX58EnsemblGeneIds (GRCh38): ENSG00000107201
EnsemblGeneIds (GRCh37): ENSG00000107201
OMIM: 609631, Gene2Phenotype
DDX58 is in 3 panels
2 reviews
Arina Puzriakova (Genomics England)
DDX58 is associated with Singleton-Merten syndrome in OMIM and Gene2Phenotype.
At least 4 gain-of-function variants identified in 5 unrelated families with Singleton-Merten syndrome 2, including glaucoma in all affected individuals:
- Jang et al. 2015 (PMID: 25620203) - 2 unrelated Korean families with glaucoma and skeletal abnormalities, and different heterozygous variants in DDX58 (c.1118A>C and c.803G>T, respectively). One family additionally exhibited aortic calcification, and both families had normal dentition. Functional studies showed that both variants confer constitutive activation, resulting in increased interferon activity and interferon-stimulated gene expression.
- Ferreira et al. 2019 (PMID: 30574673) - 2 individuals from one family with SMS, including glaucoma, aortic and valvular calcification, tendon rupture, psoriasiform skin rash, and dental abnormalities. A heterozygous DDX58 gain-of-function variant (c.1551G>C) was identified by WES which resulted in constitutive upregulation of type I interferon.
- Prasov et al. 2021 (PMID: 33495304) - A heterozygous DDX58 variant (c.1529A>T) was identified in 5 individuals from 2 unrelated families from different ethnic backgrounds. Phenotypes varied with some being severely affected by systemic features and others solely with glaucoma. However, all affected subjects presented juvenile open-angle glaucoma. Functional analysis demonstrated the variant confers a dominant gain-of-function effect on interferon activity.Created: 5 Feb 2021, 11:19 a.m. | Last Modified: 5 Feb 2021, 11:19 a.m.
Panel Version: 1.0
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Singleton-Merten syndrome 2, OMIM:616298
Publications
Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)
At least two families reported where glaucoma was a feature of the presenting phenotype.
Sources: Expert listCreated: 2 Aug 2020, 10:18 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Singleton-Merten syndrome 2, MIM# 616298
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Expert list
- Phenotypes
-
- Singleton-Merten syndrome 2, MIM# 616298
- OMIM
- 609631
- Clinvar variants
- Variants in DDX58
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
- Panels with this gene
History Filter Activity
Set publications
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Publications for gene: DDX58 were set to 25620203
Set mode of pathogenicity
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Mode of pathogenicity for gene: DDX58 was changed from None to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: ddx58 has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: ddx58 has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)Gene: ddx58 has been classified as Amber List (Moderate Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)gene: DDX58 was added gene: DDX58 was added to Glaucoma congenital. Sources: Expert list Mode of inheritance for gene: DDX58 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: DDX58 were set to 25620203 Phenotypes for gene: DDX58 were set to Singleton-Merten syndrome 2, MIM# 616298 Review for gene: DDX58 was set to AMBER